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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttacttctccattgccttattgtcttttagtagtagttccaaattgatgttgattttacagtatggttaggctaggtctatttcctgaaaacttagtttgttaattaactgcattattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG

Basic information

species Zea mays
transcript GRMZM2G181151_T03
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G181151_T02 (Zea mays), 3'ss of exon 4
lower sequence: LOC_Os06g37180.1 (Oryza sativa), 3'ss of exon 4
---gttacttctccattgcc-ttattgtcttttagtagtagttccaaattgatgttgattttacagtatggttaggctaggtctatt-tcctgaaaactta-gtttgttaattaactgcattattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG
| | || || ||| | | | |||||| | | | | |||| | ||| || | || | ||| || ||| ||| || ||||| |||| | | | ||| || | |||||| |||||||| ||||| ||||||||||||||||| || || |||||||| ||||| |||
gttatcatttttctatttttatgaatatctttt-----ttgcttgagattgtattcagatttgcatttaccctatgatagttccattatccagagcacttacgttttattactgacttacttgattttcagGTCTTTGAAGGCACTTCAGGAATAGACAACAAATATACCACTGTGCAGTTCACAGGAGAG

upper sequence: GRMZM2G181151_T02 (Zea mays), 3'ss of exon 4
lower sequence: AT1G76030.1 (Arabidopsis thaliana), 3'ss of exon 4
gttacttctccattgccttattgtcttttagtagtagttccaaattgatgttgattttacagtatggttaggctaggtctatttcctgaaaacttagtttgttaattaactgcattattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG
|| |||| || | | | | | | | || | | | | || | |||| | ||| | | | || | | |||| | || |||||||||||||||||| |||||||| |||||||| | ||||||||||| || ||||| |||
----gtttaggattgttttttgtccatgttacttcaaacattgaataatacttaaacacaaacttcgtgaatctag--tcacttcttcagtgacttacttatcacttaa--gggtt-----tcagGTTTTTGAAGGAACATCTGGAATTGACAACAAGTTTACAACCGTGCAATTCACAGGAGAG

upper sequence: GRMZM2G181151_T02 (Zea mays), 3'ss of exon 4
lower sequence: Vv18s0001g01020.t01 (Vitis vinifera), 3'ss of exon 4
gttacttctccattgccttattgtctttta-gtagtagttccaaattgatgttgattttacagtatggttaggctaggtctatttcctgaaaacttagtttgttaattaactgcatta--ttcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG
| | |||||| || || | | || | | | || | ||||| | | | || | | |||| ||| | ||| ||| ||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||
-----------------ctgctaccttttaagttttaatctttagatggtatatagttaatagtatat--------aatttctctctt---attttagcttgatcattttctgttttaatttccccagGTTTTTGAAGGCACTTCTGGAATTGACAACAAATACACAACCGTGCAATTTACTGGGGAG

upper sequence: GRMZM2G181151_T02 (Zea mays), 3'ss of exon 4
lower sequence: Vv03s0038g02760.t01 (Vitis vinifera), 3'ss of exon 4
gttacttctccattgccttattgtcttttagtagtagttccaaattgatgttgattttacagtatggttaggctaggtctatttcctgaaaacttagtttgttaattaactgcattattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG
||| || |||| ||| | || ||| || || || || || | | | ||| | | || ||| | | || | || |||||||||||||||||||||||||| ||||||||||||||||| || || |||||||| |||
--------------------gtgttttggcttagtccttcttg--tcatattg-ttatataggatttttttattt--tttgtttttcaattaaatactttactcagcttatgttgttttggccagGTTTTTGAAGGAACTTCTGGAATTGACAACAAATACACAACTGTTCAATTTACAGGGGAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33102148|gb|CF062108.1|CF062108
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211464055|gb|FL062026.1|FL062026
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32919410|gb|CF024222.1|CF024222
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211464049|gb|FL062020.1|FL062020
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|33102006|gb|CF061966.1|CF061966
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGAAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211045587|gb|FL062119.1|FL062119
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         G-TTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|31664290|gb|CD573015.1|CD573015
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211474170|gb|FL062078.1|FL062078
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32908718|gb|CF013531.1|CF013531
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|33100953|gb|CF060913.1|CF060913
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211223693|gb|FL399500.1|FL399500
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTT-GAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32945519|gb|CF050338.1|CF050338
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACANCCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211279000|gb|FL407011.1|FL407011
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTT-GAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211469118|gb|FL062056.1|FL062056
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32933270|gb|CF038082.1|CF038082
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTAAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211476688|gb|FL062089.1|FL062089
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211466586|gb|FL062037.1|FL062037
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32944897|gb|CF049716.1|CF049716
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211131888|gb|FL371457.1|FL371457
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211471640|gb|FL062065.1|FL062065
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|8367004|gb|BE049949.1|BE049949
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATAC
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATAC
EST: gi|211332062|gb|FL381794.1|FL381794
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32851420|gb|CD991101.1|CD991101
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211124910|gb|FL425297.1|FL425297
EST:     TCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTT
genomic: TCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTG-TGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTT
EST: gi|33100666|gb|CF060626.1|CF060626
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211461534|gb|FL062016.1|FL062016
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32846162|gb|CD985843.1|CD985843
EST:     CTCGCCGT-GTCAAGTCC-TGAAGTTGATGGAGAAAAAGCTGTTG-GCAG                         G-TTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211045584|gb|FL062116.1|FL062116
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211132918|gb|FL391883.1|FL391883
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTT-GAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211029340|gb|FL373997.1|FL373997
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32933397|gb|CF038209.1|CF038209
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|9953932|gb|BE640515.1|BE640515
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTACAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|33100729|gb|CF060689.1|CF060689
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211172669|gb|FL375066.1|FL375066
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTT-GAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211464053|gb|FL062024.1|FL062024
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211439866|gb|FL422480.1|FL422480
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32942779|gb|CF047598.1|CF047598
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211427007|gb|FL427232.1|FL427232
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|13389395|gb|BG462701.1|BG462701
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211034220|gb|FL370384.1|FL370384
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211459002|gb|FL061993.1|FL061993
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211332674|gb|FL416300.1|FL416300
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTT-GAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211466587|gb|FL062038.1|FL062038
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTT-GAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32931129|gb|CF035941.1|CF035941
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCGGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211466593|gb|FL062044.1|FL062044
EST:     TCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: TCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAG-CTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211466594|gb|FL062045.1|FL062045
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211448189|gb|FL410292.1|FL410292
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|24462502|gb|BM660033.1|BM660033
EST:     CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAG                         GTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTTGCAGTT
genomic: CTCGCCGTGGTCAAGTCCTTGAAGTTGATGGAGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGT-GCAGTT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggctaggtctatttcctgaaaacttagtttgttaattaactgcattattcatcagGTTTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG
                                 aattaac  putative branch site (score: 2)
 aaaacttagtttgtta  TA-rich tract