1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtattcaattccttgcatttacttgttgctgcaattgattaaaagttaagtccatggtctgttacttcagttagtagaataacatccatataggtacttacccttctgttttacttcattttctttccagTACTGGACAGATAGTTTCATTCAGTGGTCCCCTCTGGGAACCTACATGGCAACGGTTCATAGGCAGGGATCACAGGTGTGGGGCGGTGAAAATGGCTTCG
species | Zea mays |
transcript | GRMZM2G174757_T01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATTGGAATGATGCAAGAAAGCTAGCACCTGAGCTTGTTTTTCAAAAGCAG TACTGGACAGATAGTTTCATTCAGTGGTCCCCTCTGGGAACCTACATGGCAEST: gi|22542190|gb|BU092628.1|BU092628
genomic: ATTGGAATGATGCAAGAAAGCTAGCACCTGAGCTTGTTTTTCAAAAGCAGgtattcaatt ... ttctttccagTACTGGACAGATAGTTTCATTCAGTGGTCCCCTCTGGGAACCTACATGGCA
EST: ATTGGAATGATGCAAGAAAGCTAGCACCTGAGCTTGTTTTTCAAAAGCAG TACTGGACAGATAGTTTCTTTCAGTGGTCCCCTCTGGGAACCTACATGGCAEST: gi|149079566|gb|EE168554.2|EE168554
genomic: ATTGGAATGATGCAAGAAAGCTAGCACCTGAGCTTGTTTTTCAAAAGCAGgtattcaatt ... ttctttccagTACTGGACAGATAGTTTCATTCAGTGGTCCCCTCTGGGAACCTACATGGCA
EST: ATTGGAATGATGCAAGAAAGCTAGCACCTGAGCTTGTTTTTCAAAAGCAG TACTGGACAGATAGTTTCATTCAGTGGTCCCCTCTGGGAACCTACATGGCAEST: gi|60350764|gb|DN217737.1|DN217737
genomic: ATTGGAATGATGCAAGAAAGCTAGCACCTGAGCTTGTTTTTCAAAAGCAGgtattcaatt ... ttctttccagTACTGGACAGATAGTTTCATTCAGTGGTCCCCTCTGGGAACCTACATGGCA
EST: ATTGGAATGATGCAAGAAAGCTAGCACCTGAGCTTGTTTTTCAAAAGCAG TACTGGACAGATAGTTTCATTCAGTGGTCCCCTCTGGGAACCTACATGGCA
genomic: ATTGGAATGATGCAAGAAAGCTAGCACCTGAGCTTGTTTTTCAAAAGCAGgtattcaatt ... ttctttccagTACTGGACAGATAGTTTCATTCAGTGGTCCCCTCTGGGAACCTACATGGCA
agaataacatccatataggtacttacccttctgttttacttcattttctttccagTACTGGACAGATAGTTTCATTCAGTGGTCCCCTCTGGGAACCTACATGGCAACGGTTCATAGGCAGGGATCACAGGTGTGGGGCGGTGAAAATGGCTTCG
tacttac putative branch site (score: 708)
tacttacccttctgtt CT-rich tract
ttttacttcatttt TA-rich tract