1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaactcagcacattcagcgtgtgtgtgtgtgtgcgtgcttgctcgcttaattacctgctgacaacctacgcgcattcaattctcatcagGTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGACGGAAGGCCCGGGTGTGTTCAGAACACATGCGCCCACAGGGCATGCCCGC
species | Zea mays |
transcript | GRMZM2G171390_T01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATG GTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGACEST: gi|71437528|gb|DR818578.1|DR818578
genomic: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATGgtaactcagc ... ttctcatcagGTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGAC
EST: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATG GTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGACEST: gi|76290758|gb|DV030326.1|DV030326
genomic: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATGgtaactcagc ... ttctcatcagGTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGAC
EST: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATG GTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGACEST: gi|91055542|gb|EB165960.1|EB165960
genomic: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATGgtaactcagc ... ttctcatcagGTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGAC
EST: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATG GTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGACEST: gi|78089256|gb|DV517630.1|DV517630
genomic: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATGgtaactcagc ... ttctcatcagGTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGAC
EST: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATG GTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGACEST: gi|149014006|gb|EE043522.2|EE043522
genomic: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATGgtaactcagc ... ttctcatcagGTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGAC
EST: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATG GTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGACEST: gi|71447084|gb|DR828134.1|DR828134
genomic: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATGgtaactcagc ... ttctcatcagGTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGAC
EST: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATG GTGCCAATCGACTGCTTCGAGGA
genomic: TCTGGTACCCAGTCGCCTTCTCCAGCGATCTCAAGGCTCCTGACACCATGgtaactcagc ... ttctcatcagGTGCCAATCGACTGCTTCGAGGA
gtgcttgctcgcttaattacctgctgacaacctacgcgcattcaattctcatcagGTGCCAATCGACTGCTTCGAGGAGCAGTGGGTGATCTTCCGAGGCAAAGACGGAAGGCCCGGGTGTGTTCAGAACACATGCGCCCACAGGGCATGCCCGC
tgctgac putative branch site (score: 2)
ttctcatc putative PPT
ttaatta TA-rich tract