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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagcatccacacaaagcagccaacattttttccagcatgattctcgttaattgataatgtgatattttatgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGATGAGCCTACCCTTGTTAAAGACCTTGATGTTCACGAATTGGCAGCATTC

Basic information

species Zea mays
transcript GRMZM2G165747_T02
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G165747_T02 (Zea mays), 3'ss of exon 4
lower sequence: PP1S27_81V6.1 (Physcomitrella patens), 3'ss of exon 3
------------------gtaagcatccacacaaagcagccaacattttttcca-gcatgattc-tcgttaattgataatgtgat--att--ttatgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGATGAGCCTACCCTTGTTAAAGACCTTGATGTTCACGAATTGGCAGCATTC
                  ||   || | ||   |    ||  |  |||     | |  ||   | | ||| | |  | || ||||  ||   || |    |  ||||| ||  |  | |||||||||| ||||||||| |||||||||||| | || ||||| |  ||||| |  ||||| || | |    | |  |  || || 
gtaagtgtgctttgagaagtcgacacctacgtgacattgcagaactttcggatacgtgtggagcgttgttgagttttcatctgattgatccgttgttcgttacagGGAAGTAATCACGGAACTGAAGGAAGCTGGTGCCTCATGGATTCAGCTGGACGAGCCCAAGCTTGTCATGGACCTAGAAGCTGCTCAGTACGAGGCTTTT
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211333693|gb|FL127551.1|FL127551
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|31354595|gb|CD438952.1|CD438952
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211335854|gb|FL127557.1|FL127557
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211325033|gb|FL127492.1|FL127492
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211331525|gb|FL127534.1|FL127534
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211325031|gb|FL127490.1|FL127490
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211327192|gb|FL127501.1|FL127501
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211331526|gb|FL127535.1|FL127535
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211335857|gb|FL127560.1|FL127560
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211325028|gb|FL127487.1|FL127487
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211327185|gb|FL127494.1|FL127494
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211325029|gb|FL127488.1|FL127488
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211325025|gb|FL127484.1|FL127484
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211333686|gb|FL127544.1|FL127544
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211471799|gb|FL068499.1|FL068499
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAANGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211331521|gb|FL127530.1|FL127530
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211331520|gb|FL127529.1|FL127529
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211327184|gb|FL127493.1|FL127493
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211471802|gb|FL068502.1|FL068502
EST:     AAAACTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGNGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211329358|gb|FL127511.1|FL127511
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGGTGTTTCTGAACTGAAGGCAGCTGGNGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211333687|gb|FL127545.1|FL127545
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211327195|gb|FL127504.1|FL127504
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211325026|gb|FL127485.1|FL127485
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211331527|gb|FL127536.1|FL127536
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211329365|gb|FL127518.1|FL127518
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211331515|gb|FL127524.1|FL127524
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211333685|gb|FL127543.1|FL127543
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211329369|gb|FL127522.1|FL127522
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211329363|gb|FL127516.1|FL127516
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211333688|gb|FL127546.1|FL127546
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211471803|gb|FL068503.1|FL068503
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211331528|gb|FL127537.1|FL127537
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211335858|gb|FL127561.1|FL127561
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211327189|gb|FL127498.1|FL127498
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211333684|gb|FL127542.1|FL127542
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211333681|gb|FL127539.1|FL127539
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211335851|gb|FL127554.1|FL127554
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211331523|gb|FL127532.1|FL127532
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211335856|gb|FL127559.1|FL127559
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
EST: gi|211331516|gb|FL127525.1|FL127525
EST:     AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAA                         GGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA
genomic: AAATCTTTCTCTCTTCTTTCGCTTCTTGGCAGCATTCTTCCCATCTACAAgtaagcatcc ... tgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attttttccagcatgattctcgttaattgataatgtgatattttatgaaatgaagGGAGGTTGTTTCTGAACTGAAGGCAGCTGGTGCTTCATGGATTCAGTTTGATGAGCCTACCCTTGTTAAAGACCTTGATGTTCACGAATTGGCAGCATTC
                        aattgat  putative branch site (score: 4)
                      ttaattgataatgtga  TA-rich tract