1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaattacagctaattttttgcagtgatctgttgtgatcttccattgcgtatggcttactgttcacaatgcaatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATGATCCACCTGCTGGTGTTCAG
species | Zea mays |
transcript | GRMZM2G158479_T02 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|67028963|gb|CO457712.1|CO457712
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|16379087|gb|BI992745.1|BI992745
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|5055406|gb|AI734293.1|AI734293
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|15323508|gb|BI478611.1|BI478611
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|60338899|gb|DN205872.1|DN205872
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|211036752|gb|FL261404.1|FL261404
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|74245922|gb|DT653836.1|DT653836
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|16919521|gb|BM074230.1|BM074230
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: TAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGGTTTTCGCTCTTCTAACTGGATATCAEST: gi|15590213|gb|BI674829.1|BI674829
genomic: TAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTAT-GTTTTCGCTCTTCTTACTGGATATCA
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|31356905|gb|CD441262.1|CD441262
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|60396397|gb|DN229266.1|DN229266
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|14243082|gb|BG840790.2|BG840790
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|149097934|gb|EE183875.2|EE183875
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|6012601|gb|AW062038.1|AW062038
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|31354314|gb|CD438671.1|CD438671
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|78075104|gb|DV503538.1|DV503538
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|40303643|gb|CK348030.1|CK348030
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATEST: gi|211323658|gb|FL286664.1|FL286664
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
EST: GGTTTGCTAATGGTGGTGCATACC-TCCGGACCTTAGTCTCATCACAAAG GCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
genomic: GGTTTGCTAATGGTGGTGCATACCCTCCGGACCTTAGTCTCATCACAAAGgtaattacag ... aatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCAT
atctgttgtgatcttccattgcgtatggcttactgttcacaatgcaatcattcagGCAAGGCACAATGGTCAGAACTATGTTTTCGCTCTTCTTACTGGATATCATGATCCACCTGCTGGTGTTCAG
ggcttac putative branch site (score: 3)
aatcatt TA-rich tract