Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacagaatgatgaaatatatatatatatatttgcgagtcctttggcaaatgacagcgtctgcttgctaacaaaactgtccgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCACGGCGGCTGCATCCTGACCACCTCCTCTTATGCCGCGCTCAACGGCGTCT

Basic information

species Zea mays
transcript GRMZM2G153268_T01
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G153268_T01 (Zea mays), 3'ss of exon 4
lower sequence: LOC_Os04g45010.1 (Oryza sativa), 3'ss of exon 4
------------gtacagaatgatgaaatatat-atatatatatttgcgagtc-ctttggcaaatgacagcgtctgcttgctaacaaaactgtccgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCACGGCGGCTGCATCCTGACCACCTCCTCTTATGCCGCGCTCAACGGCGTCT
             ||           |||| || || ||  | | |||  ||  |||| | ||||||||   |       |   | |  ||||   || | ||| ||||| ||||||| ||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||| || || ||||||||||| || |
gttacagcccaattaatttgcctctgaataaatgatttaattttctgcatgttacttttggaaatgacaatatgacgccac--gctatcctgtt--ttattcagCTAACTTTGGAAGGTGAGTCATACCACAAGAGCTGCTTCAAGTGCTCTCATGGAGGCTGCATCCTGACCACCTCCTCCTACGCGGCGCTCAACGGGGTGT
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32869149|gb|CF008831.1|CF008831
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|87154241|gb|DY399030.1|DY399030
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906529|gb|CF011342.1|CF011342
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21331083|gb|BQ486464.1|BQ486464
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32868830|gb|CF008512.1|CF008512
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869962|gb|CF009644.1|CF009644
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869130|gb|CF008812.1|CF008812
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|26455055|gb|CA826638.1|CA826638
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906145|gb|CF010958.1|CF010958
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906711|gb|CF011524.1|CF011524
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21390364|gb|BQ528413.1|BQ528413
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21330643|gb|BQ486024.1|BQ486024
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32868902|gb|CF008584.1|CF008584
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32868798|gb|CF008480.1|CF008480
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869732|gb|CF009414.1|CF009414
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906188|gb|CF011001.1|CF011001
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21330230|gb|BQ485611.1|BQ485611
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|22545300|gb|BU097659.1|BU097659
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|94476869|gb|EB705827.1|EB705827
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCCTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869347|gb|CF009029.1|CF009029
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32868820|gb|CF008502.1|CF008502
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21481463|gb|BQ578132.1|BQ578132
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGGGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21390720|gb|BQ528769.1|BQ528769
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869678|gb|CF009360.1|CF009360
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|6918832|gb|AW400362.1|AW400362
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|26455721|gb|CA827304.1|CA827304
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906776|gb|CF011589.1|CF011589
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906353|gb|CF011166.1|CF011166
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|91056696|gb|EB167114.1|EB167114
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869004|gb|CF008686.1|CF008686
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869935|gb|CF009617.1|CF009617
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21390974|gb|BQ529023.1|BQ529023
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|76284258|gb|DV023826.1|DV023826
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|7216536|gb|AW562658.1|AW562658
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906072|gb|CF010885.1|CF010885
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21330566|gb|BQ485947.1|BQ485947
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|22545227|gb|BU097586.1|BU097586
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32871088|gb|CF010770.1|CF010770
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21331044|gb|BQ486425.1|BQ486425
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|22545271|gb|BU097644.1|BU097644
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32870933|gb|CF010615.1|CF010615
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869706|gb|CF009388.1|CF009388
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32870944|gb|CF010626.1|CF010626
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32870848|gb|CF010530.1|CF010530
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32870419|gb|CF010101.1|CF010101
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32868838|gb|CF008520.1|CF008520
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21329906|gb|BQ485287.1|BQ485287
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21480717|gb|BQ577386.1|BQ577386
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|7227421|gb|AW566062.1|AW566062
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32870261|gb|CF009943.1|CF009943
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|76282033|gb|DV021601.1|DV021601
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21390840|gb|BQ528889.1|BQ528889
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21390269|gb|BQ528318.1|BQ528318
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869728|gb|CF009410.1|CF009410
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906697|gb|CF011510.1|CF011510
EST:     GTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: GTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32870106|gb|CF009788.1|CF009788
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21390973|gb|BQ529022.1|BQ529022
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|22545379|gb|BU097738.1|BU097738
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21330198|gb|BQ485579.1|BQ485579
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21390851|gb|BQ528900.1|BQ528900
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAG-GTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32870141|gb|CF009823.1|CF009823
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32870238|gb|CF009920.1|CF009920
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21331059|gb|BQ486440.1|BQ486440
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21390394|gb|BQ528443.1|BQ528443
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21331166|gb|BQ486533.1|BQ486533
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|78107661|gb|DV526079.1|DV526079
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32868879|gb|CF008561.1|CF008561
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32868808|gb|CF008490.1|CF008490
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906097|gb|CF010910.1|CF010910
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906151|gb|CF010964.1|CF010964
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869561|gb|CF009243.1|CF009243
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|116828641|gb|EC859969.1|EC859969
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTGACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21330488|gb|BQ485869.1|BQ485869
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTNAAGAAG                         TTAACTCTGGGAAGGGCGAGCCCTACCACAAGAGCTGCTTCAAGTGCTCGC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGG-AAGG-CGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGC
EST: gi|37426500|gb|CF651005.1|CF651005
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869921|gb|CF009603.1|CF009603
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCA
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCA
EST: gi|116825115|gb|EC868813.1|EC868813
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCT
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCT
EST: gi|21236524|gb|BQ441983.1|BQ441983
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869817|gb|CF009499.1|CF009499
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21480986|gb|BQ577669.1|BQ577669
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGGGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32871116|gb|CF010798.1|CF010798
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906740|gb|CF011553.1|CF011553
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGC
EST: gi|21330501|gb|BQ485882.1|BQ485882
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32868963|gb|CF008645.1|CF008645
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCA
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCA
EST: gi|21481063|gb|BQ577746.1|BQ577746
EST:     CCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCA
genomic: CCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAA-Ggtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCA
EST: gi|21330850|gb|BQ486231.1|BQ486231
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869103|gb|CF008785.1|CF008785
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21330823|gb|BQ486204.1|BQ486204
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906542|gb|CF011355.1|CF011355
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21330444|gb|BQ485825.1|BQ485825
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|22545294|gb|BU097639.1|BU097639
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21390888|gb|BQ528937.1|BQ528937
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|87154644|gb|DY399433.1|DY399433
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21481497|gb|BQ578180.1|BQ578180
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32906089|gb|CF010902.1|CF010902
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869933|gb|CF009615.1|CF009615
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|76018262|gb|DT945432.1|DT945432
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|32869627|gb|CF009309.1|CF009309
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21331042|gb|BQ486423.1|BQ486423
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21330731|gb|BQ486112.1|BQ486112
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
EST: gi|21330036|gb|BQ485417.1|BQ485417
EST:     CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG                         TTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC
genomic: CCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 176

ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAGgtacagaatg ... cgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCACGGCGGCTGCATCCTGACCACCTCCTCTTATGCCGCGCTCAACGGCGTCT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gagtcctttggcaaatgacagcgtctgcttgctaacaaaactgtccgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCACGGCGGCTGCATCCTGACCACCTCCTCTTATGCCGCGCTCAACGGCGTCT
                             tgctaac  putative branch site (score: 176)
                                taacaaaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtacagaatgatgaaatatatatatatatatttgcgagtcctttggcaaatgacagcgtctgcttgctaacaaaactgtccgttgtccagTTAACTCTGGAAGGCGAGTCCTACCACAAGAGCTGCTTCAAGTGCTCGCACGGCGGCTGCATCCTGACCACCTCCTCTTATGCCGCGCTCAACGGCGTCT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTCCTC