Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcaggaaccttcctgtcaaatgtctagttcctgttgacagtgtctatattgctggctcacactttctttttcttttatgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACGGCTTAAGGAGTCTCTTTCCGTGAATGTCATGTTAGAGTTTTTGGTTATG

Basic information

species Zea mays
transcript GRMZM2G140116_T01
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G140116_T01 (Zea mays), 3'ss of exon 4
lower sequence: LOC_Os02g40880.1 (Oryza sativa), 3'ss of exon 4
gtcaggaaccttcctgtcaaatgtctagttcctgttgacagtgtctatattgctggctcacactttctttttcttttatgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACGGCTTAAGGAGTCTCTTTCCGTGAATGTCATGTTAGAGTTT-TTGGTTATG
|||||  | | |  | |||| ||  |   ||||||| | |    |||  |  || ||| ||||     ||||||    | |||||||||||| |||||||||||||||||||| || ||||| |||||| |  || ||||||| | |||  | |   | |  | |  |   |   |   |  |  || 
gtcagacatcctattctcaattggtttactcctgtttataa---ctac-tcactagcttacaccaatgttttct---gtatgaacagAGGGGAGGTGCTATCAGGCAAGAGCTTGCGAAGCTCAAGAAGACTGCCGCGGCTTA-GTAGTGCCATGTTGAGTTTTTGGTTCCAAGTTGGATCAGCAATA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211533761|gb|FL303615.1|FL303615
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211530756|gb|FL303602.1|FL303602
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGA
EST: gi|15079886|gb|BI388867.1|BI388867
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTTGCGAAGATTAAG                         AGGGGTGGTGCTATCAGGCAAGAGCTCGCCAAGCTTAAGAAGGCGTCCACA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211536770|gb|FL303629.1|FL303629
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGT
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGT
EST: gi|211261808|gb|FL064149.1|FL064149
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211527752|gb|FL303583.1|FL303583
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211146222|gb|FL303713.1|FL303713
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211539771|gb|FL303636.1|FL303636
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|213170681|gb|FM184208.1|FM184208
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|40336326|gb|CK370396.1|CK370396
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCATGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|31664510|gb|CD573443.1|CD573443
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211372372|gb|FL088523.1|FL088523
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTTGCGAAGATTAAG                         AGGGGTGGTGCTATCAGGCAAGAGC
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGC
EST: gi|67022364|gb|CO451113.1|CO451113
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211536765|gb|FL303624.1|FL303624
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCG
EST: gi|32910529|gb|CF015341.1|CF015341
EST:     CATCGCTCAATGACTNTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|113702161|gb|EE679665.1|EE679665
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCATGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|15313541|gb|BI478750.1|BI478750
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTTGCGAAGATTAAG                         AGGGGTGGTGCTATCAGGCAAGAGCTCGCCAAGCTTAAGAAGGCGTCCACA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211143352|gb|FL303681.1|FL303681
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCT
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCT
EST: gi|211261811|gb|FL064152.1|FL064152
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211536771|gb|FL303630.1|FL303630
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|148986741|gb|EE030533.2|EE030533
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|71306187|gb|DR789244.1|DR789244
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211530749|gb|FL303595.1|FL303595
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|4646709|gb|AI491572.2|AI491572
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCCCG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211524749|gb|FL303573.1|FL303573
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGC
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGC
EST: gi|50332509|gb|CO527635.1|CO527635
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211536769|gb|FL303628.1|FL303628
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|33942215|gb|CF348815.1|CF348815
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|87155926|gb|DY400715.1|DY400715
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTTGCGAAGATTAAG                         AGGGGTGGTGCTATCAGGCAAGAGCTCGCCAAGCTTAAGAAGGCGTCCACA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211533760|gb|FL303614.1|FL303614
EST:     ATCGCTCAATTGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTC
genomic: ATCGCTCAAT-GACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTC
EST: gi|22545563|gb|BU097922.1|BU097922
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTTGCGAAGATTAAG                         AGGGGTGGTGCTATCAGGCAAGAGCTCGCCAAGCTTAAGAAGGCGTCCACA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211533755|gb|FL303609.1|FL303609
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211530750|gb|FL303596.1|FL303596
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATKCTGGCGAAGATTAAT                         AGGGGCGGTGCTATCAGGC
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGC
EST: gi|211143351|gb|FL303680.1|FL303680
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|16919951|gb|BM074436.1|BM074436
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211146218|gb|FL303709.1|FL303709
EST:     ATCGCTCCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAG
genomic: ATCGCTC-AATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAG
EST: gi|211542785|gb|FL303650.1|FL303650
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCANGCAAGAGCTCGCCAAGCTGAAGAA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAA
EST: gi|211533763|gb|FL303617.1|FL303617
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCG
EST: gi|211146220|gb|FL303711.1|FL303711
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTTGCGAAGATTAAG                         AGGGGTGGTGCTATCAGGCAAGAGCTCGCCAAGCTTAAGAAGGCGTCCA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCA
EST: gi|15313539|gb|BI478749.1|BI478749
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTTGCGAAGATTAAG                         AGGGGTGGTGCTATCAGGCAAGAGCTCGCCAAGCTTAAGAAGGCGTCCACA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|37386208|gb|CF630286.1|CF630286
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCATGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211542797|gb|FL303662.1|FL303662
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|60349639|gb|DN216612.1|DN216612
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|31664511|gb|CD573444.1|CD573444
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211144787|gb|FL303698.1|FL303698
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211141913|gb|FL303665.1|FL303665
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|29130154|gb|CB380858.1|CB380858
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|60343863|gb|DN210836.1|DN210836
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCATGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211261814|gb|FL064155.1|FL064155
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|37393120|gb|CF633817.1|CF633817
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCATGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211143361|gb|FL303690.1|FL303690
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211527756|gb|FL303587.1|FL303587
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211143357|gb|FL303686.1|FL303686
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTTGCGAAGATTAAG                         AGGGGTGGTGCTATCAGGCAAGAGCTCGCCAAGCTTAAGAAGGCGTCCACA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|60341459|gb|DN208432.1|DN208432
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|60354734|gb|DN221707.1|DN221707
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|32912862|gb|CF017674.1|CF017674
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|71417121|gb|DR803927.1|DR803927
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211539777|gb|FL303642.1|FL303642
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAACTCGC
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGC
EST: gi|5069721|gb|AI737686.1|AI737686
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTTGCGAAGATTAAG                         AGGGGTGGTGCTATCAGGCAAGAGCTCGCCAAGCTTAAGAAGGCGTCCACA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|61119757|gb|DN560718.1|DN560718
EST:     CATCGCTCAATGACTTCGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211527749|gb|FL303580.1|FL303580
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGA
EST: gi|211144785|gb|FL303696.1|FL303696
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|32908584|gb|CF013397.1|CF013397
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGC
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGC
EST: gi|32933013|gb|CF037825.1|CF037825
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211542788|gb|FL303653.1|FL303653
EST:     CATCSCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|71427650|gb|DR808700.1|DR808700
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211533752|gb|FL303606.1|FL303606
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211533754|gb|FL303608.1|FL303608
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|15100497|gb|BI396288.1|BI396288
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTTGCGAAGATTAAG                         AGGGGTGGTGCTATCAGGCAAGAGCTCGCCAAGCTTAAGAAGGCGTCCACA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211144784|gb|FL303695.1|FL303695
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|26557228|gb|CA829463.1|CA829463
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|120481304|gb|EH211252.1|EH211252
EST:     TGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: TGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211530748|gb|FL303594.1|FL303594
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         ANGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTC
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTC
EST: gi|60348097|gb|DN215070.1|DN215070
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211141917|gb|FL303669.1|FL303669
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|32912436|gb|CF017248.1|CF017248
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211524745|gb|FL303569.1|FL303569
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAA
EST: gi|60357236|gb|DN224209.1|DN224209
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211144790|gb|FL303701.1|FL303701
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211542784|gb|FL303649.1|FL303649
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAA
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAA
EST: gi|211146223|gb|FL303714.1|FL303714
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTC
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTC
EST: gi|211261810|gb|FL064151.1|FL064151
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|60399266|gb|DN232080.1|DN232080
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|71306186|gb|DR789243.1|DR789243
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|32911128|gb|CF015940.1|CF015940
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211141915|gb|FL303667.1|FL303667
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211141916|gb|FL303668.1|FL303668
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCCAC
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCC-AC
EST: gi|32908470|gb|CF013283.1|CF013283
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211536764|gb|FL303623.1|FL303623
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAKAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
EST: gi|211144794|gb|FL303705.1|FL303705
EST:     CATCGCTCAATGACTTTGAYAGGTTCAAAGTCATGCTGGCGAASATTAAG                         AGGGGCGGTGCTATC
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATC
EST: gi|211539783|gb|FL303648.1|FL303648
EST:     CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAG                         AGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG
genomic: CATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 627

GTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGAGCATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACGGCTTAAGGAGTCTCTTTCCGTGAATGTCATGTTAGAGTTTTTGGTTATG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 637

GTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGAGCATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACGGCTTAAGGAGTCTCTTTCCGTGAATGTCATGTTAGAGTTTTTGGTTATG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 571

GTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGAGCATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACGGCTTAAGGAGTCTCTTTCCGTGAATGTCATGTTAGAGTTTTTGGTTATG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 395

GTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGAGCATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCTGGCGAAGATTAAGgtcaggaacc ... atgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACGGCTTAAGGAGTCTCTTTCCGTGAATGTCATGTTAGAGTTTTTGGTTATG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgttgacagtgtctatattgctggctcacactttctttttcttttatgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACGGCTTAAGGAGTCTCTTTCCGTGAATGTCATGTTAGAGTTTTTGGTTATG
                      ggctcac  putative branch site (score: 395)
                        ctcacactttcttttt  CT-rich tract
                               tttctttttcttttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtcaggaaccttcctgtcaaatgtctagttcctgttgacagtgtctatattgctggctcacactttctttttcttttatgtgaacagAGGGGCGGTGCTATCAGGCAAGAGCTCGCCAAGCTGAAGAAGGCGTCCACGGCTTAAGGAGTCTCTTTCCGTGAATGTCATGTTAGAGTTTTTGGTTATG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG