1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtacttgatttatatcatccactgatgttagttgatggttgtgattttgaggttcttttggggcctgattggtttgtacttctctgttcagGTCAATTATGGTGCAAGTTTCATAGAATATTTTGCAGAGGAAGCAAAGCGCATATATGGTGATATAATTCCTCCAACTTTATCTGATCGTAGATTGTTGG
species | Zea mays |
transcript | GRMZM2G128114_T03 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AAGAAGTCCTTGGTGAG GTCAATTATGGTGCAAGTTTCATAGAATATTTTGCAGAGGAAGCAAAGCGCEST: gi|211450282|gb|FK953943.1|FK953943
genomic: AAGAAGCCCTTGGTGAGgtacttgatt ... ctctgttcagGTCAATTATGGTGCAAGTTTCATAGAATATTTTGCAGAGGAAGCAAAGCGC
EST: TTCTCATGACACTGGAGCAGGGGAAACCTATGAAAGAAGCCCTTGGTGAG GTCAATTATGGTGCAAGTTTCATAGAATATTTTGCAGAGGAAGCAAAGCGCEST: gi|211509962|gb|FL438235.1|FL438235
genomic: TTCTCATGACACTGGAGCAGGGGAAACCTATGAAAGAAGCCCTTGGTGAGgtacttgatt ... ctctgttcagGTCAATTATGGTGCAAGTTTCATAGAATATTTTGCAGAGGAAGCAAAGCGC
EST: TTCTCATGACACTGGAGCAGGGGAAACCTATGAAAGAAGCCCTTGGTGAG GTCAATTATGGTGCAAGTTTCATAGAATATTTTGCAGAGGAAGCAAAGCGCEST: gi|67040351|gb|CO466606.1|CO466606
genomic: TTCTCATGACACTGGAGCAGGGGAAACCTATGAAAGAAGCCCTTGGTGAGgtacttgatt ... ctctgttcagGTCAATTATGGTGCAAGTTTCATAGAATATTTTGCAGAGGAAGCAAAGCGC
EST: TTCTCATGACACTGGAGCAGGGGAAACCTATGAAAGAAGCCCTTGGTGAG GTCAATTATGGTGCAAGTTTCATAGAATATTTTGCAGAGGAAGCAAAGCGC
genomic: TTCTCATGACACTGGAGCAGGGGAAACCTATGAAAGAAGCCCTTGGTGAGgtacttgatt ... ctctgttcagGTCAATTATGGTGCAAGTTTCATAGAATATTTTGCAGAGGAAGCAAAGCGC
ggttgtgattttgaggttcttttggggcctgattggtttgtacttctctgttcagGTCAATTATGGTGCAAGTTTCATAGAATATTTTGCAGAGGAAGCAAAGCGCATATATGGTGATATAATTCCTCCAACTTTATCTGATCGTAGATTGTTGG
gcctgat putative branch site (score: 4)
cttctctgttc putative PPT
tgatttt TA-rich tract