1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaatgcattagttggaattggatgattctacatcttagccattcattggaacctatgtcaacatatctgaacatccctccttgacaactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGAGAAGAAATATGGAGGGTGGTTAAGCGCGAAGATGGC
species | Zea mays |
transcript | GRMZM2G118003_T01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGAAGG-GTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|87157163|gb|DY401952.1|DY401952
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211195344|gb|FK979452.1|FK979452
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32848755|gb|CD988436.1|CD988436
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32808644|gb|CD960878.1|CD960878
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211322178|gb|FK979475.1|FK979475
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: GAAAGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTTCAGCA-G GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTEST: gi|32928641|gb|CF033453.1|CF033453
genomic: GAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTT-CAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTT
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|6826935|gb|AW330578.1|AW330578
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGAAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|109179241|gb|EC379886.1|EC379886
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCGGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211192948|gb|FK979444.1|FK979444
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211192942|gb|FK979438.1|FK979438
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|60397967|gb|DN230783.1|DN230783
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211195341|gb|FK979449.1|FK979449
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTEST: gi|211192947|gb|FK979443.1|FK979443
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCT
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211190538|gb|FK979424.1|FK979424
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTTCGCTTGEST: gi|148934074|gb|EC878088.2|EC878088
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|149096066|gb|EE181748.2|EE181748
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|67024539|gb|CO453288.1|CO453288
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGAAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211197749|gb|FK979464.1|FK979464
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: NGAAG-TGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|31910377|gb|CD651393.1|CD651393
genomic: -GAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|71331060|gb|DR802360.1|DR802360
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|148969028|gb|EE019736.2|EE019736
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32929351|gb|CF034163.1|CF034163
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211322184|gb|FK979481.1|FK979481
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|22472597|gb|BU037077.1|BU037077
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211322188|gb|FK979485.1|FK979485
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTEST: gi|211195352|gb|FK979460.1|FK979460
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTT
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211192936|gb|FK979432.1|FK979432
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32929206|gb|CF034018.1|CF034018
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|148931885|gb|EC877350.2|EC877350
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|21760120|gb|BQ635661.1|BQ635661
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|148931067|gb|EC873678.2|EC873678
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32928537|gb|CF033349.1|CF033349
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211190539|gb|FK979425.1|FK979425
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTTAC-ACTATGATCTTCCTCTTGCGCTTEST: gi|6564100|gb|AW231722.1|AW231722
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTT-ACCACTATGATCTTCCTCTTGCGCTT
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGAAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|31353887|gb|CD438244.1|CD438244
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|21390100|gb|BQ528149.1|BQ528149
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211192950|gb|FK979446.1|FK979446
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|6636984|gb|AW261256.1|AW261256
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGAAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211195346|gb|FK979454.1|FK979454
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|211192937|gb|FK979433.1|FK979433
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTTCATCAACCTTTACEST: gi|28909524|gb|CB330973.1|CB330973
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTAC
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32929111|gb|CF033923.1|CF033923
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32848750|gb|CD988431.1|CD988431
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACTACTATGATCTTCCTCTTGCGCTTGEST: gi|32837200|gb|CD976878.1|CD976878
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|148996928|gb|EE035737.2|EE035737
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|67018030|gb|CO446779.1|CO446779
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGAAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32929433|gb|CF034245.1|CF034245
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32929642|gb|CF034454.1|CF034454
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTCCAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCACCCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32928848|gb|CF033660.1|CF033660
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32847307|gb|CD986988.1|CD986988
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32837471|gb|CD977149.1|CD977149
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32929091|gb|CF033903.1|CF033903
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: GAAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32849499|gb|CD989180.1|CD989180
genomic: G-AAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|26558653|gb|CA830888.1|CA830888
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGGTGTAGCGTATTACAATAATTTGGA-AAACTATCCTGGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|32928412|gb|CF033224.1|CF033224
genomic: AGGTGTAGCGTATTACAATAATTT-GATAAACTAT-CT-GCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGEST: gi|101393334|gb|EB818598.1|EB818598
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTG
EST: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAG GCATGACTCCTTACATCAACCTTTTAC-ACTATGATCTTCCTCTTGCGCTT
genomic: AGAAGGTGTAGCGTATTACAATAATTTGATAAACTATCTGCTTCAGCAAGgtaatgcatt ... aactgagcagGCATGACTCCTTACATCAACCTTT-ACCACTATGATCTTCCTCTTGCGCTT
attcattggaacctatgtcaacatatctgaacatccctccttgacaactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGAGAAGAAATATGGAGGGTGGTTAAGCGCGAAGATGGC
ccttgac putative branch site (score: 208)
aacatat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaatgcattagttggaattggatgattctacatcttagccattcattggaacctatgtcaacatatctgaacatccctccttgacaactgagcagGCATGACTCCTTACATCAACCTTTACCACTATGATCTTCCTCTTGCGCTTGAGAAGAAATATGGAGGGTGGTTAAGCGCGAAGATGGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG