Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgcggttgtttatatctactttcagctgctgcacttcatttgttttaactcagtaacatggttgaaatgataacacttccgaattctgttgtgatgtggcattgatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCAAGTTCCTCATTGTTATCTAGTCTCAA

Basic information

species Zea mays
transcript GRMZM2G104017_T04
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G104017_T04 (Zea mays), 3'ss of exon 4
lower sequence: LOC_Os05g01600.2 (Oryza sativa), 3'ss of exon 4
---gtatgcggttgtttatatctactttc------agctgctgcacttcatttgttttaactca-gtaacatggttgaaatgataacacttccgaattctgttgtgatgtggcattgatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCAAGTTCCTCATTGTTATCTAGTCTCAA
   | | ||   |||| || | || || |      |  || |  |||| | ||  |  |||  | ||  |||| || |  ||     || ||  || |||||||| |||| |  ||| | | | ||||||||||||| ||||| ||||| || || |||||||| ||||| ||||||||||| |||||||   || | ||||| |     | || ||   | |   
gtaggaagctcctgttcatctgtagttgctacaataattgttaaactttactttctggaacatatgtctcatgattaacctgtggtaacatctaaaatctgttgt-atgtcgtgttggtttgc-agATGTGGATATCAAAGGACGAGTACGACGAATCTGGCCCAGCAATTGTCCACAGGAAATGCTTCTGATTTTCTCAAGTGCTCTGCTCTTGTCATCTGTAGT

upper sequence: GRMZM2G104017_T04 (Zea mays), 3'ss of exon 4
lower sequence: GLYMA08G15480.1 (Glycine max), 3'ss of exon 4
gtatgcggttgtttatatctactttcagctgctgcacttcatttgttttaactcagtaacatggttgaaatgataacacttccgaattctgttgtgatgtggcattgatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCAAGTTCCTCATTGTTATCTAGTCTCAA--
                                 |   ||  ||| |  | | | ||     | ||     ||  |        |||| ||      |    |   || | |  ||||||||||| || || |  || |||||||||||||||||  | || ||||||||||||||||||||  |||   |||| |   ||     || |   | ||  
---------------------------------gtgattattttatcatgaattagctctttcgt--gtgtgccattttcattgaatgcta--aaaaaaatgttgtggttttgcagATGTGGATTTCTAAAGGTGAATATGATGAGTCTGGCCCATCCATTGTCCACAGGAAGTGCTTCTAACTTCT--AAGTACAAAATATGCTTCAATGGTGAATT

upper sequence: GRMZM2G104017_T04 (Zea mays), 3'ss of exon 4
lower sequence: GLYMA04G39380.1 (Glycine max), 3'ss of exon 4
gtatgcggttgtttatatctactttcagctgctgcacttcatttgttttaactcagtaacatggttgaaatg-ataacacttccgaattctgttgtgatgtggcattgatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCA--AGTTCCTCATTGTTATCTAGTCTCAA
                                 |   ||  |||||||      | | |  |  |  | | |  || || ||    |||    |   |  ||   ||| | |  |||||||||||||| ||||  || |||||||||||||| ||  | || |||||||||||||||||||| || |   |  | | | | | || |   |  | |   
---------------------------------gtgattgttttgtttattgcaaattatctcttccacacgtgtaccaatt--agattgaacta-aacatg-ttttggttttgcagATGTGGATATCGAAGGGTGAATATGATGAGTCTGGTCCATCCATTGTCCACAGGAAGTGCTTCTAAGTCCAAAAGAAATGCTTTAATGGTGAGTTATGTT--

upper sequence: GRMZM2G104017_T04 (Zea mays), 3'ss of exon 4
lower sequence: GLYMA05G32220.1 (Glycine max), 3'ss of exon 3
gtatgcggttgtttatatctactttcagctgctgcacttcatttgttttaactcagtaacatggttgaaatgataacacttccgaattctgttgtgatgtggcattgatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCAAGTTCCTCATTGTTATCTAGTCTCAA--
                                 |   ||| ||| |  | | | ||     |  |  |  || |  || || |      || |   |  ||   | | | |  ||||||||||| || || |  || |||||||||||||||||  | || ||||||||||||||||||||  |||   |||| |   ||     || |   | ||  
---------------------------------gtgattcttttatcattaattagc----tcttccatgtgttc-cattttcattgattgctaaaaaatgttgt-ggttttgcagATGTGGATTTCTAAAGGTGAATATGATGAGTCTGGCCCATCCATTGTCCACAGGAAGTGCTTCTAACTTCT--AAGTACAAAATATGCTTCAATGGTGAAAT

upper sequence: GRMZM2G104017_T04 (Zea mays), 3'ss of exon 4
lower sequence: GLYMA06G15520.1 (Glycine max), 3'ss of exon 4
gtatgcggttgtttatatctactttcagctgctgcacttcatttgttttaactcagtaacatggttgaaatg-ataacacttccgaattctgttgtgatgtggcattgatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCA--AGTTCCTCATTGTTATCTAGTCTCAA
                             || |    ||  |     ||| |||  | ||     ||  | | | |     |  ||| |||     ||    |  ||| | |  ||||||||||| || ||||  || |||||||||||||| ||  | ||||||||||||||||||||||| ||     |  | | | | | || |   |  | |   
------------------------gtgattgtttagtttattacaaattagctctttgacgcatgtgccaagtagattgaatttgaactcta----gaacatgttttggttttgcagATGTGGATTTCAAAGGGTGAATATGATGAGTCTGGTCCATCCATCGTCCACAGGAAGTGCTTCTAAGTCAAAAAGAAATGCTTTAATGGTGAGTTATGTT--

upper sequence: GRMZM2G104017_T04 (Zea mays), 3'ss of exon 4
lower sequence: GLYMA06G15520.2 (Glycine max), 3'ss of exon 4
gtatgcggttgtttatatctactttcagctgctgcacttcatttgttttaactcagtaacatggttgaaatg-ataacacttccgaattctgttgtgatgtggcattgatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCA--AGTTCCTCATTGTTATCTAGTCTCAA
                             || |    ||  |     ||| |||  | ||     ||  | | | |     |  ||| |||     ||    |  ||| | |  ||||||||||| || ||||  || |||||||||||||| ||  | ||||||||||||||||||||||| ||     |  | | | | | ||              
------------------------gtgattgtttagtttattacaaattagctctttgacgcatgtgccaagtagattgaatttgaactcta----gaacatgttttggttttgcagATGTGGATTTCAAAGGGTGAATATGATGAGTCTGGTCCATCCATCGTCCACAGGAAGTGCTTCTAAGTCAAAAAGAAATGCTTTAATG--------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5055675|gb|AI734562.1|AI734562
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|211175964|gb|FL481224.1|FL481224
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|32862716|gb|CF002398.1|CF002398
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|7958409|gb|AW862711.1|AW862711
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|211040808|gb|FL449651.1|FL449651
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60358970|gb|DN225943.1|DN225943
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|211141248|gb|FL136001.1|FL136001
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|211141247|gb|FL136000.1|FL136000
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|6827368|gb|AW331011.1|AW331011
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCGCTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|33104023|gb|CF063983.1|CF063983
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGTCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|67025625|gb|CO454374.1|CO454374
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|74034835|gb|DT535326.1|DT535326
EST:     GTGTCTGGATAGGAGAGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|5005540|gb|AI711602.1|AI711602
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|116817139|gb|EC859950.1|EC859950
EST:     GATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|31910431|gb|CD651420.1|CD651420
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|33101116|gb|CF061076.1|CF061076
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|78024103|gb|DV492490.1|DV492490
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGTTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTTTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|24768904|gb|CA404033.1|CA404033
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|211141242|gb|FL135995.1|FL135995
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|7844322|gb|AW787544.1|AW787544
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60353944|gb|DN220917.1|DN220917
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60359217|gb|DN226190.1|DN226190
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|166440109|gb|EG105457.1|EG105457
EST:     GCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|4572912|gb|AI586561.1|AI586561
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|29544771|gb|CB605379.1|CB605379
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|24767778|gb|CA402914.1|CA402914
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60400718|gb|DN233525.1|DN233525
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|33094069|gb|CF054063.1|CF054063
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|211040809|gb|FL449652.1|FL449652
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|29946197|gb|CB816028.1|CB816028
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|31364208|gb|CD448563.1|CD448563
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|4572760|gb|AI586409.1|AI586409
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|61117777|gb|DN558738.1|DN558738
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|37396459|gb|CF635520.1|CF635520
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|4966639|gb|AI691495.1|AI691495
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCNCTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|33103825|gb|CF063785.1|CF063785
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|211172578|gb|FL479879.1|FL479879
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGATTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|32850591|gb|CD990272.1|CD990272
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|61117776|gb|DN558737.1|DN558737
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|56462075|gb|CK986373.1|CK986373
EST:     TGTCTGGATAGGA-GGTCCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: TGTCTGGATAGGAGGGT-CGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|31355715|gb|CD440072.1|CD440072
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|24766569|gb|CA401718.1|CA401718
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|31406148|gb|CD484880.1|CD484880
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60401506|gb|DN234313.1|DN234313
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60351433|gb|DN218406.1|DN218406
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|31357486|gb|CD441843.1|CD441843
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60357026|gb|DN223999.1|DN223999
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60341376|gb|DN208349.1|DN208349
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|149017499|gb|EE154353.2|EE154353
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTTTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|8103376|gb|AW928017.1|AW928017
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60338072|gb|DN205045.1|DN205045
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|18162309|gb|BM332148.1|BM332148
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|6057073|gb|AW091478.1|AW091478
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCNCTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCCC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|78544807|gb|DV622305.1|DV622305
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|116815008|gb|EC857636.1|EC857636
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60357632|gb|DN224605.1|DN224605
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|32832142|gb|CD971820.1|CD971820
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|149082826|gb|EE172051.2|EE172051
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|23199482|gb|BU582047.1|BU582047
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCCC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60358515|gb|DN225488.1|DN225488
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|30087680|gb|CB885886.1|CB885886
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|6127244|gb|AW129890.1|AW129890
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|24770196|gb|CA405325.1|CA405325
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|32940655|gb|CF045474.1|CF045474
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|4572907|gb|AI586556.1|AI586556
EST:     CGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: CGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|31360462|gb|CD444819.1|CD444819
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60344588|gb|DN211561.1|DN211561
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60342165|gb|DN209138.1|DN209138
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|32850593|gb|CD990274.1|CD990274
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|211141245|gb|FL135998.1|FL135998
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|7844321|gb|AW787543.1|AW787543
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60354845|gb|DN221818.1|DN221818
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|33093779|gb|CF053773.1|CF053773
EST:     GTGTCTGCATAGGAGGTTCGATCCTAGCTTCGCTCAGCGCTTTCCAACAG                         ATGTGGATATCCAAGCAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|20802602|gb|BQ293652.1|BQ293652
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|31358696|gb|CD443053.1|CD443053
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|78023831|gb|DV492218.1|DV492218
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|32930701|gb|CF035513.1|CF035513
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|20337033|gb|BQ172663.1|BQ172663
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|4967204|gb|AI692098.1|AI692098
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCCC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|10191469|gb|BE761545.1|BE761545
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCG
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCG
EST: gi|32941554|gb|CF046373.1|CF046373
EST:     GTGTCTGGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|32942469|gb|CF047288.1|CF047288
EST:     GGATAGGAGGTTCGATCCTAGCTTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60348732|gb|DN215705.1|DN215705
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|37382933|gb|CF628438.1|CF628438
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
EST: gi|60354866|gb|DN221839.1|DN221839
EST:     GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAG                         ATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC
genomic: GTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 45 (downstream exon)
Score: 297

ACCAAGCAGCATGAAGATCAAGGTCGTCGCACCACCTGAGAGGAAGTACAGTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCAAGTTCCTCATTGTTATCTAGTCTCAA


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 230

ACCAAGCAGCATGAAGATCAAGGTCGTCGCACCACCTGAGAGGAAGTACAGTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCAAGTTCCTCATTGTTATCTAGTCTCAA


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 115

ACCAAGCAGCATGAAGATCAAGGTCGTCGCACCACCTGAGAGGAAGTACAGTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCAAGTTCCTCATTGTTATCTAGTCTCAA


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 271

ACCAAGCAGCATGAAGATCAAGGTCGTCGCACCACCTGAGAGGAAGTACAGTGTCTGGATAGGAGGGTCGATCCTAGCCTCGCTCAGCACTTTCCAACAGgtatgcggtt ... gatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCAAGTTCCTCATTGTTATCTAGTCTCAA




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tggttgaaatgataacacttccgaattctgttgtgatgtggcattgatgtaccagATGTGGATATCCAAGGAGGAGTATGATGAGTCTGGCCCGGCAATCGTCCACAGGAAGTGCTTCTAGGTTCCGCAAGTTCCTCATTGTTATCTAGTCTCAA
      aaatgataa  TA-rich tract