Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ccagatccctgttttttttaaaaaaaattcgcaagtaagaaattcgggtcgattatcgttgtgatgtcctgaagtctggaaatgtatgtttcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGGGAAGCTGAACAAGCAGAGGATTCCACTTAGCAACAACAGTGTCATAGAG

Basic information

species Zea mays
transcript GRMZM2G100225_T01
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G100225_T01 (Zea mays), 3'ss of exon 4
lower sequence: AT2G01250.1 (Arabidopsis thaliana), 3'ss of exon 5
ccagatccctgttttttttaaaaaaaattcgcaagtaagaaattcgggtcgattatcgttgtgatgtcctgaagtctggaaatgtatgtttcg--tctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGGGAAGCTGAACAAGCAGAGGATTCCACTTAGCAACAACAGTGTCATAGAG
         | | | | |  |     || |  ||      |||  |   | || |          ||| |||||  ||  | | |    |||   | | ||||| ||| ||| ||||||| || | ||| || |||||||||||||||||||| ||||| ||| | ||||||||  |  | |   |||||  | |  |||||
--------gtatgtatatacactctcatcctaaaccctttaatctgatgctatgagataacaagagtcttgaagagtgtgacttttctcttctgtttttcagATTCCCTAACTTGAAGAGTGTCAAGGAATTGATCTACAAGAGAGGTTACGGAAAGCTTAACCACCAGAGGATAGCTTTGACTGACAACTCTATTGTAGAG

upper sequence: GRMZM2G100225_T01 (Zea mays), 3'ss of exon 4
lower sequence: AT2G44120.1 (Arabidopsis thaliana), 3'ss of exon 5
ccagatccctgttttttttaaaaaaaattcgcaagtaagaaattcgggtcgattatcgt-tgtgatgtcctgaagtctggaaatgtatgtttcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGGGAAGCTGAACAAGCAGAGGATTCCACTTAGCAACAACAGTGTCATAGAG
          || |    |   |     || |    || |   |   ||  | ||   | | || ||  || ||     |||   ||| | | ||   ||||||||| ||| |||||||||||| |||  | |||||||| |||||||| || ||||||||| | ||||||||  ||||||   |||||    |  | || 
----------gtatgcaatctgattctctctctttcaataggattatgtaaactaaactatatgctgctctaaacc---gaatgatatatctggt--gcagATACCCAAACTTGAAGAGCGTTAAGGAACTGATCTACAAAAGAGGTTATGGAAAGCTGAACCACCAGAGGATAGCACTTACTGACAACTCCATTGTGGAT

upper sequence: GRMZM2G100225_T01 (Zea mays), 3'ss of exon 4
lower sequence: PP1S243_40V6.1 (Physcomitrella patens), 3'ss of exon 3
-----------------ccagatccctgttttttttaaaaaaaattcgcaagtaagaaat-tcgggtcgattatcgttgtgatgtcctgaagtctggaaatgtatgtttcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGGGAAGCTGAACAAGCAGAGGATTCCACTTAGCAACAACAGTGTCATAGAG
                 ||||    ||| ||| |    | |||| |       | | | | ||   || |  || | |    ||    ||    |   ||    | |    | ||||| |||||||||||||| | |||| ||||||| ||||||||| | || ||||| |||| | ||||     | | | |  | |   ||||||| || || |||
gtgagttggaaaaatcaccagtcttctggtttgtcacgagaaaagtaatggaaatgtattatcatctccacaattgat----tgcaacgatagttactaacccttatcat-tttccagGTACCCCAACCTGAAAACCGTTCGGGAGTTGATCTACAAGCGCGGATACGGCAAGCAGGACAAATGCCGCACTGCCTTGACGGACAACAGCGTAATTGAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|60395830|gb|DN228700.1|DN228700
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|5713769|gb|AI943761.1|AI943761
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211240856|gb|FK946039.1|FK946039
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAG
EST: gi|110517350|gb|EE021937.1|EE021937
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|78117960|gb|DV536347.1|DV536347
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|29946048|gb|CB815952.1|CB815952
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|15590336|gb|BI674952.1|BI674952
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|149102800|gb|EE288150.2|EE288150
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|148942864|gb|EC887904.2|EC887904
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|15545663|gb|BI643457.1|BI643457
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGNTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|15590337|gb|BI674953.1|BI674953
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|6564051|gb|AW231673.1|AW231673
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|76281974|gb|DV021542.1|DV021542
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|29543732|gb|CB604112.1|CB604112
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211240855|gb|FK946038.1|FK946038
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|148959313|gb|EE010718.2|EE010718
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|148971095|gb|EE021938.2|EE021938
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|37399663|gb|CF637164.1|CF637164
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|30031555|gb|CB833406.1|CB833406
EST:     GCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: GCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211479374|gb|FK946123.1|FK946123
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|78026611|gb|DV494998.1|DV494998
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211479369|gb|FK946118.1|FK946118
EST:     AGGCAACCATTAACATGCTGCGCAGGGTGNGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAG
genomic: AGGCAACCATTAACATGCTGCGCAGGGTG-GAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAG
EST: gi|149102801|gb|EE188286.2|EE188286
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|67016962|gb|CO445711.1|CO445711
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|60344504|gb|DN211477.1|DN211477
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|9742866|gb|BE519014.1|BE519014
EST:     GGCAACCATTAACATGCTGCGCAGGGTGTTATCTCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: GGCAACCATTAACATGCTGCGCAGGGTG-GAGC-CATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|60395635|gb|DN228505.1|DN228505
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|33467857|gb|CF244906.1|CF244906
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|149071019|gb|EE159423.2|EE159423
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211243089|gb|FK946050.1|FK946050
EST:     AGGCAACCATTTAACATGCTGCGCAGGGTGGARCCATATGTTGCGTACGG                         ATACCC-AACCTGAAGAGCGTTAGG
genomic: AGGCAACCATT-AACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGG
EST: gi|211482264|gb|FK946136.1|FK946136
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGG
EST: gi|211247554|gb|FK946077.1|FK946077
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGA
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGA
EST: gi|211247552|gb|FK946075.1|FK946075
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGC-ATATGTTGCGTACGG                         ATACCC-AACC
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACC
EST: gi|211478074|gb|FL460410.1|FL460410
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|19770446|gb|BQ035167.1|BQ035167
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|30031554|gb|CB833405.1|CB833405
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|60345506|gb|DN212479.1|DN212479
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|24773766|gb|CA409020.1|CA409020
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|29946159|gb|CB816009.1|CB816009
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|91871891|gb|EB401848.1|EB401848
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCACCCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|71329987|gb|DR801732.1|DR801732
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211479375|gb|FK946124.1|FK946124
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGGAGTTGATCTACAAGAGAGGTTACG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGG-AGTTAATCTACAAGAGAGGTTACG
EST: gi|76920831|gb|DV168330.1|DV168330
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATTTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|149037347|gb|EE155366.2|EE155366
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211252028|gb|FK946116.1|FK946116
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|29946157|gb|CB816008.1|CB816008
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|22133707|gb|BQ833860.1|BQ833860
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|60347673|gb|DN214646.1|DN214646
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|91871892|gb|EB401849.1|EB401849
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|60339800|gb|DN206773.1|DN206773
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|20300409|gb|BQ163352.1|BQ163352
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|60396128|gb|DN228997.1|DN228997
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|148961744|gb|EE012517.2|EE012517
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211249785|gb|FK946089.1|FK946089
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTG
EST: gi|211249796|gb|FK946100.1|FK946100
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|22546509|gb|BU098820.1|BU098820
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211240850|gb|FK946033.1|FK946033
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|149079503|gb|EE168481.2|EE168481
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|148999796|gb|EE036810.2|EE036810
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211238607|gb|FK946015.1|FK946015
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTAAGGGGAGTTGATCCTACTAGAGAGGTTAC
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGG-AGTTAATC-TACAAGAGAGGTTAC
EST: gi|211238606|gb|FK946014.1|FK946014
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211245321|gb|FK946061.1|FK946061
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|16926647|gb|BM079715.1|BM079715
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|22521534|gb|BU080345.1|BU080345
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211482266|gb|FK946138.1|FK946138
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|8930135|gb|BE224779.1|BE224779
EST:     TAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: TAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211495554|gb|FL012930.1|FL012930
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGGAGTTGATCTACAAGAGAGGTTACG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGG-AGTTAATCTACAAGAGAGGTTACG
EST: gi|78107800|gb|DV526218.1|DV526218
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211243091|gb|FK946052.1|FK946052
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|20507051|gb|BQ279463.1|BQ279463
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211245325|gb|FK946065.1|FK946065
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|29543408|gb|CB603804.1|CB603804
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211236377|gb|FK946007.1|FK946007
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCG
EST: gi|76281975|gb|DV021543.1|DV021543
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|109637727|gb|EC591272.1|EC591272
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGGAGTTGATCTAACAAGAGAGGTTAC
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGG-AGTTAATCTA-CAAGAGAGGTTAC
EST: gi|76920834|gb|DV168331.1|DV168331
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211245328|gb|FK946068.1|FK946068
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|60340312|gb|DN207285.1|DN207285
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|149037348|gb|EE155367.2|EE155367
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|101381880|gb|EB812997.1|EB812997
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCACCCTGAAGAGCGTTAGGGAGTTAATTTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211479379|gb|FK946128.1|FK946128
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|28987622|gb|CB351726.1|CB351726
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|78117959|gb|DV536346.1|DV536346
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|67024197|gb|CO452946.1|CO452946
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|4776558|gb|AI665561.1|AI665561
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211245322|gb|FK946062.1|FK946062
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTTATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211240849|gb|FK946032.1|FK946032
EST:     AAGGCAACCATTAACATGCTGCGCAGG-TGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTT
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTT
EST: gi|60345224|gb|DN212197.1|DN212197
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|149081162|gb|EE170270.2|EE170270
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211240857|gb|FK946040.1|FK946040
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCC-AACCCTGA-GAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACC-TGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACG
EST: gi|5006118|gb|AI712180.1|AI712180
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211249791|gb|FK946095.1|FK946095
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|50332854|gb|CO527980.1|CO527980
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|60355558|gb|DN222531.1|DN222531
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|101384487|gb|EB814288.1|EB814288
EST:     AAGGCAACCATTAACATGCTGCGCATGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAACAGCGTTAGGGAGTTAATCTACTAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211240854|gb|FK946037.1|FK946037
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACC
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACC
EST: gi|211252018|gb|FK946106.1|FK946106
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCCTGA-GAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACC-TGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACG
EST: gi|60358729|gb|DN225702.1|DN225702
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|9732011|gb|BE510763.1|BE510763
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGC
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGC
EST: gi|211236373|gb|FK946003.1|FK946003
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|29946050|gb|CB815953.1|CB815953
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|31406345|gb|CD485077.1|CD485077
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|211243085|gb|FK946046.1|FK946046
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCC-AACCTGAAGAGCGTTTAGGGAGTT
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTT-AGGGAGTT
EST: gi|86467189|gb|DY233559.1|DY233559
EST:     AAGGCACCCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|31611832|gb|CD568454.1|CD568454
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|67032162|gb|CO460911.1|CO460911
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTGATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|31663983|gb|CD573163.1|CD573163
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|149071018|gb|EE159422.2|EE159422
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCACCCTGAAGAGCGTTAGGGAGTTAATCTCCAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|78084199|gb|DV512592.1|DV512592
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATCCCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|60340678|gb|DN207651.1|DN207651
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
EST: gi|149106753|gb|EE188649.2|EE188649
EST:     AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGG                         ATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG
genomic: AAGGCAACCATTAACATGCTGCGCAGGGTGGAGCCATATGTTGCGTACGGgtaagtctgt ... tcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gggtcgattatcgttgtgatgtcctgaagtctggaaatgtatgtttcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGGGAAGCTGAACAAGCAGAGGATTCCACTTAGCAACAACAGTGTCATAGAG
                                           tttcgtctcc  CT-rich tract
                                  aaatgtat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ccagatccctgttttttttaaaaaaaattcgcaagtaagaaattcgggtcgattatcgttgtgatgtcctgaagtctggaaatgtatgtttcgtctccagATACCCCAACCTGAAGAGCGTTAGGGAGTTAATCTACAAGAGAGGTTACGGGAAGCTGAACAAGCAGAGGATTCCACTTAGCAACAACAGTGTCATAGAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT