1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtttgtttgctgtaatctcctcaatgtttggtcgtctctcaagagcagggactacgttttccacgtgcttcaatttaattacccaactaacttcaatctgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACTCCTCTTCCGGACCTGGTGACCATCCACACCC
species | Zea mays |
transcript | GRMZM2G099352_T04 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|29545002|gb|CB605180.1|CB605180
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|6540618|gb|AW225280.1|AW225280
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTCGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|148940207|gb|EC884975.2|EC884975
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|15353016|gb|BI502627.1|BI502627
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|211305446|gb|FL415290.1|FL415290
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: AGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|45568440|gb|CK986064.1|CK986064
genomic: AGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTCGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|32939100|gb|CF043919.1|CF043919
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: ACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|13557963|gb|BG549319.1|BG549319
genomic: ACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|91876194|gb|EB406151.1|EB406151
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTTTCAGACAG GGTGTTTTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|37379543|gb|CF626516.1|CF626516
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTCGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|15426980|gb|BI542802.1|BI542802
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|32850182|gb|CD989863.1|CD989863
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: ACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|28911403|gb|BM075425.2|BM075425
genomic: ACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|60342068|gb|DN209041.1|DN209041
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|74243889|gb|DT651803.1|DT651803
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|31909983|gb|CD651193.1|CD651193
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|71445502|gb|DR826552.1|DR826552
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|5713842|gb|AI943827.1|AI943827
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|37374483|gb|CF623604.1|CF623604
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTCGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|4887427|gb|AI677526.1|AI677526
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|7031285|gb|AW461023.1|AW461023
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACNCGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|37388633|gb|CF631526.1|CF631526
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTCGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|88751101|gb|DY535242.1|DY535242
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|29545035|gb|CB605213.1|CB605213
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|33096662|gb|CF056656.1|CF056656
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|14529240|gb|BI096373.1|BI096373
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|50338564|gb|CO533690.1|CO533690
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|71445501|gb|DR826551.1|DR826551
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|28911348|gb|BM074837.2|BM074837
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACGCGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|60398429|gb|DN231245.1|DN231245
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|31910330|gb|CD651369.1|CD651369
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|31664142|gb|CD573322.1|CD573322
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|32865418|gb|CF005100.1|CF005100
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|89250739|gb|DY622525.1|DY622525
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|30306735|gb|CD001408.1|CD001408
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|27521967|gb|CA989073.1|CA989073
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGNNNNNNNCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|93282755|gb|EB675019.1|EB675019
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|60341589|gb|DN208562.1|DN208562
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|94478638|gb|EB707596.1|EB707596
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCCCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|6742594|gb|AW313409.1|AW313409
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|16926690|gb|BM079758.1|BM079758
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|76019501|gb|DT946671.1|DT946671
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|211138256|gb|FL356401.1|FL356401
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|31405890|gb|CD484622.1|CD484622
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|71774007|gb|DR971894.1|DR971894
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|21828608|gb|BQ703292.1|BQ703292
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|24763191|gb|CA398374.1|CA398374
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTCGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|5670902|gb|AI932165.1|AI932165
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTTTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|211416665|gb|FL317443.1|FL317443
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCARACAG GGTGTTCTCGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|37385348|gb|CF629811.1|CF629811
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTCGGTATCAAGGTGAAGATCATGCTTGACT-GGACCCGAAGGGCEST: gi|17921579|gb|BM259230.1|BM259230
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTCGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|211098205|gb|FL312088.1|FL312088
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|28911352|gb|BM348864.2|BM348864
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|32846529|gb|CD986210.1|CD986210
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: ACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|50326252|gb|CO521378.1|CO521378
genomic: ACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|88751339|gb|DY535480.1|DY535480
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTTTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|211149446|gb|FL325047.1|FL325047
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGAEST: gi|47962772|gb|CN845481.1|CN845481
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGA
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTCGGTATCAAGGTGAACATCATGCTTGACTGGGACCCGAAGGGCEST: gi|60342368|gb|DN209341.1|DN209341
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|71425280|gb|DR806590.1|DR806590
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|18383691|gb|BM416891.1|BM416891
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|213186778|gb|FM188940.1|FM188940
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|32911113|gb|CF015925.1|CF015925
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|211248983|gb|FL468401.1|FL468401
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTCGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|22520626|gb|BU079437.1|BU079437
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGGGGTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|60352449|gb|DN219422.1|DN219422
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|5124500|gb|AI746236.1|AI746236
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: AGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGEST: gi|16927388|gb|BM080457.1|BM080457
genomic: AGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGAC-AGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGG
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|5608080|gb|AI901747.1|AI901747
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGCCAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|78116934|gb|DV535321.1|DV535321
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCEST: gi|9731105|gb|BE509857.1|BE509857
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: AGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGTCTGGGACCCGAAGGGCEST: gi|88755067|gb|DY539208.1|DY539208
genomic: AGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTTTCAGACAG GGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAACGAGTACATTGACTCGGCTGTGAGACACGTTCTTCTCAGACAGgtttgtttgc ... tgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
acgttttccacgtgcttcaatttaattacccaactaacttcaatctgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACTCCTCTTCCGGACCTGGTGACCATCCACACCC
aactaac putative branch site (score: 1)
ttcaatttaatta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtttgtttgctgtaatctcctcaatgtttggtcgtctctcaagagcagggactacgttttccacgtgcttcaatttaattacccaactaacttcaatctgtcgcgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACTCCTCTTCCGGACCTGGTGACCATCCACACCC
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