1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtctgtgctaaaatttctcagcctacctataacttaagcatgccattagagattatatcgtttccctttcagGTCCAGGCTGCCAATAAGCTATTGAAGTCACTTCCACAAAGGGGCAGAAGGAAAAAACTTGATGGGGTTCCTGTTTTTAGTGCGCAAAACTTGAATATTG
species | Zea mays |
transcript | GRMZM2G097959_T01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GAAAAGCCTCACATGTTCCAGTTTGTTCCAAATGAAAAGCAG GTCCAGGCTGCCAATAAGCTATTGAAGTCACTTCCACAAAGGGGCAGAAGGEST: gi|31355876|gb|CD440233.1|CD440233
genomic: GAAAAGCCTCACATGTTCCAGTTTGTTCCAAATGAAAAGCAGgtctgtgcta ... tccctttcagGTCCAGGCTGCCAATAAGCTATTGAAGTCACTTCCACAAAGGGGCAGAAGG
EST: GAAAAGCCTCACATGTTCCAGTTTGTTCCAAATGAAAAGCAG GTCCATGCTGCCAATAAGCTATTGAAGTCACTTCCACAAAGGGGCAGAAGGEST: gi|211247171|gb|FL378131.1|FL378131
genomic: GAAAAGCCTCACATGTTCCAGTTTGTTCCAAATGAAAAGCAGgtctgtgcta ... tccctttcagGTCCAGGCTGCCAATAAGCTATTGAAGTCACTTCCACAAAGGGGCAGAAGG
EST: GAAAAGCCTCACATGTTCCAGTTTGTTCCAAATGAAAAGCAG GTCCAGGCTGCCAATAAGCTATTGAAGTCACTTCCACAAAGGGGCAGAAGG
genomic: GAAAAGCCTCACATGTTCCAGTTTGTTCCAAATGAAAAGCAGgtctgtgcta ... tccctttcagGTCCAGGCTGCCAATAAGCTATTGAAGTCACTTCCACAAAGGGGCAGAAGG
tcagcctacctataacttaagcatgccattagagattatatcgtttccctttcagGTCCAGGCTGCCAATAAGCTATTGAAGTCACTTCCACAAAGGGGCAGAAGGAAAAAACTTGATGGGGTTCCTGTTTTTAGTGCGCAAAACTTGAATATTG
ctataac putative branch site (score: 78)
tatcgtttccctttc putative PPT
attagagattatat TA-rich tract