1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgagcctcgctacaattagtcctctctcgctctcaccgatactgcagaatggagtagcttattctgagcatctgttatgctcatgacagatcggtgtttgattcctgtgtgttttccctgcagATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGCTCAACCATCCGTGGACTCCCTCTAGTTGCACAAACCACCTCAGTGCTCT
species | Zea mays |
transcript | GRMZM2G095727_T04 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAA ATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGCEST: gi|31664321|gb|CD573046.1|CD573046
genomic: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAAgtgagcctcg ... ttccctgcagATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGC
EST: GAATAATTTCTTCCAGCCCGGCGAC-A ATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGCEST: gi|78086698|gb|DV515091.1|DV515091
genomic: GAATAATTTCTTCCAGCCCGGCGACAAgtgagcctcg ... ttccctgcagATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGC
EST: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAA ATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGCEST: gi|71432179|gb|DR813229.1|DR813229
genomic: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAAgtgagcctcg ... ttccctgcagATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGC
EST: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAA ATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGCEST: gi|31441071|gb|CD510502.1|CD510502
genomic: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAAgtgagcctcg ... ttccctgcagATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGC
EST: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAA ATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGCEST: gi|89252032|gb|DY623818.1|DY623818
genomic: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAAgtgagcctcg ... ttccctgcagATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGC
EST: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAA ATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGCEST: gi|94478976|gb|EB707934.1|EB707934
genomic: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAAgtgagcctcg ... ttccctgcagATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGC
EST: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAA ATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGCEST: gi|211378749|gb|FL130659.1|FL130659
genomic: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAAgtgagcctcg ... ttccctgcagATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGC
EST: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAA ATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGC
genomic: GCGTCGCGGAGCACATGGCTTAAGAATAATTTCTTCCAGCCCGGCGACAAgtgagcctcg ... ttccctgcagATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGC
catctgttatgctcatgacagatcggtgtttgattcctgtgtgttttccctgcagATTCGCAGTTGGATTCAGCATATGCATTTTTTATGCTGACATAGGATGTGCTCAACCATCCGTGGACTCCCTCTAGTTGCACAAACCACCTCAGTGCTCT
gtttgat putative branch site (score: 5)
tgttttccct putative PPT
tttgatt TA-rich tract