Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttacttctccattctcctgattgttttttagcagtagttctaatttgattttgattctgcagtatggtcatgttagttccattcccagaaaacttagtttgttaattaactgcattattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG

Basic information

species Zea mays
transcript GRMZM2G094497_T01
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 4
lower sequence: LOC_Os06g37180.1 (Oryza sativa), 3'ss of exon 4
---gttacttctccattctcctgattgttttttagcagtagttctaatttgattttgattctgcagtatggtcatgttagttccatt-cccagaaaactta-gtttgttaattaactgcattattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG
    | | || || ||| |  ||| | | ||||     | | |  |  |||  ||    | |||| |      ||| ||||||||||  |||||  ||||| ||||  | | | |||   ||  |  ||||||||||||||| ||||| ||||||||||||||||| || || |||||||| ||||| |||
gttatcatttttctatttttatgaatatctttt-----ttgcttgagattgtattcagatttgcatttaccctatgatagttccattatccagagcacttacgttttattactgacttacttgattttcagGTCTTTGAAGGCACTTCAGGAATAGACAACAAATATACCACTGTGCAGTTCACAGGAGAG

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 4
lower sequence: AT1G76030.1 (Arabidopsis thaliana), 3'ss of exon 4
gttacttctccattctcctgattgttttttagcagtagttctaatttgattt--tgattctgcagtatggtcatgttagttccattcccagaaaacttagtttgttaattaactgcattattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG
               |   |||||||||||  |  |  | ||      |||   | || ||  |  |    | |  |   || | || |        |   ||  | || | ||  |   ||  |||||| ||||||||||| |||||||| |||||||| |  ||||||||||| || ||||| |||
-------------gtttaggattgttttttgtccatgttacttcaaacattgaataatacttaaacacaaacttcgtgaatctagtcacttcttcagtgacttacttatca-cttaagggtt--tcagGTTTTTGAAGGAACATCTGGAATTGACAACAAGTTTACAACCGTGCAATTCACAGGAGAG

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 4
lower sequence: Vv18s0001g01020.t01 (Vitis vinifera), 3'ss of exon 4
gttacttctccattctcctgattgttttttagcagtagttctaatttgattttgattctgcagtatggtcatgttagttccattcccagaaaacttagtttgttaattaactgcatta--ttcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG
                 ||| |   |||| ||   || |  | |  || | |  | |    |||||        || || |  ||  |      |||| ||| | |||  |||  |||  |||  ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||
-----------------ctgctaccttttaagttttaatctttagatggtatatagttaatagtata-------taatttctctcttat----tttagcttgatcattttctgttttaatttccccagGTTTTTGAAGGCACTTCTGGAATTGACAACAAATACACAACCGTGCAATTTACTGGGGAG

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 4
lower sequence: Vv03s0038g02760.t01 (Vitis vinifera), 3'ss of exon 4
gttacttctccattctcctgattgttttttagcagtagttctaatttgattttgattctgcagtatggtcatgttagttccattcccagaaaacttagtttgttaattaactgcattattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG
                       || |||| ||  |||| ||  ||    | |  || |  || ||  |  | ||  ||   || | |  |||  || |||  | |     ||   | ||   ||||| |||||||||||||||||||| ||||||||||||||||| || || |||||||| |||
-----------------------gtgttttggct-tagtccttcttgtcatattgttatataggatttttttattttttgtttttcaattaaa--tactttactcagcttatgttgttttggccagGTTTTTGAAGGAACTTCTGGAATTGACAACAAATACACAACTGTTCAATTTACAGGGGAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|194716810|gb|FK933969.1|FK933969
EST:     ATCGCCGTGGTCAGGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACTGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211469120|gb|FL062058.1|FL062058
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211476692|gb|FL062093.1|FL062093
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211476700|gb|FL062101.1|FL062101
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211466590|gb|FL062041.1|FL062041
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211459011|gb|FL062002.1|FL062002
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211355901|gb|FL061989.1|FL061989
EST:     ATCGCCGTGGTCAAGTCCTGTAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211042632|gb|FL062114.1|FL062114
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|58029618|gb|CX725045.1|CX725045
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|31358862|gb|CD443219.1|CD443219
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211474177|gb|FL062085.1|FL062085
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211042620|gb|FL062102.1|FL062102
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTCCTCTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32838409|gb|CD978087.1|CD978087
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|13150538|gb|BG320860.1|BG320860
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211466588|gb|FL062039.1|FL062039
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211045585|gb|FL062117.1|FL062117
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211045586|gb|FL062118.1|FL062118
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211476689|gb|FL062090.1|FL062090
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211459001|gb|FL061992.1|FL061992
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211474168|gb|FL062076.1|FL062076
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|19058187|gb|BM736854.1|BM736854
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211469113|gb|FL062051.1|FL062051
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211464051|gb|FL062022.1|FL062022
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|31355490|gb|CD439847.1|CD439847
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGATTTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211466591|gb|FL062042.1|FL062042
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211466583|gb|FL062034.1|FL062034
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211464054|gb|FL062025.1|FL062025
EST:     ATCGCCGTGGTCAAGTCCTGGAGGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211471644|gb|FL062069.1|FL062069
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAGTAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211476695|gb|FL062096.1|FL062096
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|32929168|gb|CF033980.1|CF033980
EST:     ATCGCCGTGGTCAAGTCCTGNAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTNTGAAGGAACTTCTGGAATAGACAACAAATACACANCCGTGCAG-TT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211464058|gb|FL062029.1|FL062029
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211459012|gb|FL062003.1|FL062003
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211042625|gb|FL062107.1|FL062107
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211464059|gb|FL062030.1|FL062030
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|19058466|gb|BM737133.1|BM737133
EST:     -TCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATAC
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATAC
EST: gi|211471635|gb|FL062060.1|FL062060
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211042624|gb|FL062106.1|FL062106
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|31349484|gb|CD433841.1|CD433841
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211355897|gb|FL061985.1|FL061985
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|14191177|gb|BG833407.1|BG833407
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|31351385|gb|CD435742.1|CD435742
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211042627|gb|FL062109.1|FL062109
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211461526|gb|FL062008.1|FL062008
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211471646|gb|FL062071.1|FL062071
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211471643|gb|FL062068.1|FL062068
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211466592|gb|FL062043.1|FL062043
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211042631|gb|FL062113.1|FL062113
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211355900|gb|FL061988.1|FL061988
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211042628|gb|FL062110.1|FL062110
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211474179|gb|FL062087.1|FL062087
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211471645|gb|FL062070.1|FL062070
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211476697|gb|FL062098.1|FL062098
EST:     ATCGCCGTGGTCAAGTCCTGGGAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211476690|gb|FL062091.1|FL062091
EST:     ATCGCCGTGGTCWAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGA
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGA
EST: gi|30160605|gb|CB924334.1|CB924334
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211461527|gb|FL062009.1|FL062009
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211464060|gb|FL062031.1|FL062031
EST:     TCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAADRAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: TCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAA-AGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211459000|gb|FL061991.1|FL061991
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211476699|gb|FL062100.1|FL062100
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|31628315|gb|CD526548.1|CD526548
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211469119|gb|FL062057.1|FL062057
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|14191176|gb|BG833406.1|BG833406
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211469117|gb|FL062055.1|FL062055
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACNACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211459009|gb|FL062000.1|FL062000
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211469112|gb|FL062050.1|FL062050
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211459007|gb|FL061998.1|FL061998
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211474171|gb|FL062079.1|FL062079
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211469111|gb|FL062049.1|FL062049
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211042623|gb|FL062105.1|FL062105
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAGCAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211471641|gb|FL062066.1|FL062066
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211464050|gb|FL062021.1|FL062021
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211459003|gb|FL061994.1|FL061994
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211464057|gb|FL062028.1|FL062028
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|31358847|gb|CD443204.1|CD443204
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|33102277|gb|CF062237.1|CF062237
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211469108|gb|FL062046.1|FL062046
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211459010|gb|FL062001.1|FL062001
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACRACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211466585|gb|FL062036.1|FL062036
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211476687|gb|FL062088.1|FL062088
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
EST: gi|211458999|gb|FL061990.1|FL061990
EST:     ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAG                         GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT
genomic: ATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1047

GGCCCAAAGTACCAAGAAATTGTAAACATCCGACTTGGAGATGGCACCAATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1947

GGCCCAAAGTACCAAGAAATTGTAAACATCCGACTTGGAGATGGCACCAATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1015

GGCCCAAAGTACCAAGAAATTGTAAACATCCGACTTGGAGATGGCACCAATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1910

GGCCCAAAGTACCAAGAAATTGTAAACATCCGACTTGGAGATGGCACCAATCGCCGTGGTCAAGTCCTGGAAGTTGATGGCGAAAAAGCTGTTGTGCAGgttacttctc ... tattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgttagttccattcccagaaaacttagtttgttaattaactgcattattcatcagGTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG
                                 aattaac  putative branch site (score: 1910)
                  aaaacttagtttgtta  TA-rich tract