Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgtgttcactgatgtctgtttttacaattgcattgctgctattataattttgtctgattgtttgtaaaactgaacatttgtttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTACGCAGGGTTGAGCCATATGTTGCATATGG

Basic information

species Zea mays
transcript GRMZM2G094051_T03
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G094051_T03 (Zea mays), 3'ss of exon 4
lower sequence: LOC_Os08g13690.1 (Oryza sativa), 3'ss of exon 4
gtgtgttcactgatgtctgtttttacaattgcattgctgctattataattttgtctgattgtttgtaaaactgaacatttgtttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTACGCAGGGTTGAGCCATATGTTGCATATGG
||  ||| |   |    | || ||| || ||| |     ||    ||   | || | |||   | |     | |   |||| ||  |  |||||||||||||||| |||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||
gttggtttatgaaccagttttcttagaaatgcgtgaactcttgcgtacgctggtgt-attaactttgtgcttaattgtttgatt-ctacagATCTTCAATGGTGTCTTCCTCAAGGTTAACAAGGCAACCATTAACATGCTGCGCAGGGTTGAGCCATATGTTGCATATGG

upper sequence: GRMZM2G094051_T03 (Zea mays), 3'ss of exon 4
lower sequence: LOC_Os04g51630.3 (Oryza sativa), 3'ss of exon 3
gtgtgttcactgatgtctgtttttacaattgcattgctgctattataattttgtctgattgtttgtaaaactgaacatttgtttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTACGCAGGGTTGAGCCATATGTTGCATATGG
||| ||    |  |  |  |  ||  |||     || ||  ||||| || | ||    |   |||   ||   ||  ||  |||  |  ||||||| ||||| |||||| | || |||||||| || || ||||||||||| |||||||||||||||||||||||||||||
gtgggtgtggttttcacaatcatttgaatgcacgtgttgaaattatgatatagtactgtcaattgaggaaa-aaatgttaattt--tgcagATCTTTAATGGAGTGTTCTTGAAGGTCAACAAAGCCACCATTAACATGCTGCGCAGGGTTGAGCCATATGTTGCATATGG

upper sequence: GRMZM2G094051_T03 (Zea mays), 3'ss of exon 4
lower sequence: AT3G13580.2 (Arabidopsis thaliana), 3'ss of exon 4
gtgtgttcactgatgtctgtttttacaattgcattgctgctatta-taattttgtctgattgtttgtaaaactgaacatttgtttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTACGCAGGGTTGAGCCATATGTTGCATATGG
      | ||     | || |   |   ||| | |      |  | | ||       ||| || | | | ||| || ||   ||||||  |||| ||||||||||||||| | || ||||||||||| || ||||||||||| ||| | ||||| || |||||  | |||||
-----gtaacaatcttatgatgagaactttgtaatatgttaaccaatgatacaaaaggatcgtatctgacacttaaaatc-atttattgcagATTTTCAATGGTGTGTTCTTGAAGGTCAACAAGGCAACCATTAACATGCTTCGCCGTGTTGAACCCTATGTAACCTATGG

upper sequence: GRMZM2G094051_T03 (Zea mays), 3'ss of exon 4
lower sequence: AT2G01250.1 (Arabidopsis thaliana), 3'ss of exon 4
---gtgtgttcactgatgtctgtttttacaattgc-attgctgc-tattataattttgtctg-attgtttgtaaa---actgaacatttgtttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTACGCAGGGTTGAGCCATATGTTGCATATGG
   ||  |||   | |||||   ||| |        | |  |   |   || ||| | || |  |||| |    |   | |      |||| || |  |||| ||||||||||| ||||| |||||||||||||| || || |||||||| ||| | |||||||| |||||  | || ||
tcagttggtttgataatgtcacatttcatggcaaagactagtatatgaaatgattctatcagtgttgtatactgattgattttggcattgtgtaatgcagATTTTCAATGGTGTTTTCCTTAAAGTCAACAAGGCTACGATGAACATGCTTCGCCGTGTTGAGCCCTATGTCACTTACGG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211177245|gb|FL341482.1|FL341482
EST:     CAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGGTTGTTGTYCCTCAAAGTCAACAAGGCGACTATTAACATG
genomic: CAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAAT-GG-TG-TGTTCCTCAAAGTCAACAAGGCGACTATTAACATG
EST: gi|211467480|gb|FL327940.1|FL327940
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTC
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTC
EST: gi|19436979|gb|BM953389.1|BM953389
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211489662|gb|FL352063.1|FL352063
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATT
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATT
EST: gi|71311932|gb|DR792458.1|DR792458
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211162458|gb|FL355955.1|FL355955
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211094483|gb|FL367316.1|FL367316
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211483249|gb|FL325697.1|FL325697
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211041717|gb|FL025840.1|FL025840
EST:     CAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|78112606|gb|DV531000.1|DV531000
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60349187|gb|DN216160.1|DN216160
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|71759958|gb|DR957895.1|DR957895
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTTTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211425293|gb|FL350052.1|FL350052
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|93016886|gb|EB642406.1|EB642406
EST:     CCATGCCCCCTAAGACCAGGAAGATCTTGCAGCTTTTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211197410|gb|FL309893.1|FL309893
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGAC
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGAC
EST: gi|31558660|gb|CD527872.1|CD527872
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|31611989|gb|CD568611.1|CD568611
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|22545876|gb|BU098115.1|BU098115
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|7216487|gb|AW562609.1|AW562609
EST:     GCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: GCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|67011751|gb|CO440500.1|CO440500
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|29130012|gb|CB380716.1|CB380716
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|86471442|gb|DY237812.1|DY237812
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60352654|gb|DN219627.1|DN219627
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|9255093|gb|BE345561.1|BE345561
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|37397315|gb|CF635954.1|CF635954
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60355362|gb|DN222335.1|DN222335
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211308607|gb|FL359637.1|FL359637
EST:     CATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGGCGACTATTAACATGC
genomic: CATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATT-GAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGG-CGACTATTAACATGC
EST: gi|211262500|gb|FL327821.1|FL327821
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60396956|gb|DN229775.1|DN229775
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTTCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|5152780|gb|AI759078.1|AI759078
EST:     GCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: GCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60349587|gb|DN216560.1|DN216560
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211374992|gb|FL316972.1|FL316972
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211216313|gb|FL351396.1|FL351396
EST:     CAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|29946407|gb|CB816135.1|CB816135
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211314169|gb|FL331838.1|FL331838
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACA
EST: gi|211154101|gb|FL335997.1|FL335997
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|5915417|gb|AW053058.1|AW053058
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60345376|gb|DN212349.1|DN212349
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211041714|gb|FL025837.1|FL025837
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211406874|gb|FL447487.1|FL447487
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211467080|gb|FL315617.1|FL315617
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACA
EST: gi|71311933|gb|DR792459.1|DR792459
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|37394639|gb|CF634595.1|CF634595
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60357813|gb|DN224786.1|DN224786
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211430944|gb|FL367566.1|FL367566
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACWATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|29130370|gb|CB381074.1|CB381074
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211436246|gb|FL480992.1|FL480992
EST:     TCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACAT-STA
genomic: TCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211475326|gb|FL336903.1|FL336903
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGTCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60394900|gb|DN227769.1|DN227769
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTTCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60352160|gb|DN219133.1|DN219133
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|71439147|gb|DR820197.1|DR820197
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|19058687|gb|BM737354.1|BM737354
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|9566170|gb|BE475679.1|BE475679
EST:     CGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|31611990|gb|CD568612.1|CD568612
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60354480|gb|DN221453.1|DN221453
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|29544066|gb|CB604446.1|CB604446
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|31558661|gb|CD527873.1|CD527873
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGNGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|28873880|gb|CB329810.1|CB329810
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60348516|gb|DN215489.1|DN215489
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|4646780|gb|AI621855.1|AI621855
EST:     TTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: TTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211427800|gb|FL348316.1|FL348316
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211401347|gb|FL317344.1|FL317344
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|4887399|gb|AI677498.1|AI677498
EST:     CATGC-CCCTAAG-CCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60399439|gb|DN232251.1|DN232251
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211419805|gb|FL340213.1|FL340213
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|93016887|gb|EB642407.1|EB642407
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|50323404|gb|CO518530.1|CO518530
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|67020255|gb|CO449004.1|CO449004
EST:     TGCAGCCCTAAAACCAGAAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: TGCA-CCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60393984|gb|DN226854.1|DN226854
EST:     AGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: AGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|32165010|gb|CD670328.1|CD670328
EST:     GCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: GCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|101392068|gb|EB817961.1|EB817961
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|76281808|gb|DV021376.1|DV021376
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|33094604|gb|CF054598.1|CF054598
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|5108253|gb|AI739966.1|AI739966
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|60348815|gb|DN215788.1|DN215788
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|9255094|gb|BE345562.1|BE345562
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211528037|gb|FL311006.1|FL311006
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211007030|gb|FL327098.1|FL327098
EST:     CAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211055938|gb|FL348468.1|FL348468
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|28909548|gb|CB330985.1|CB330985
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211489013|gb|FL325724.1|FL325724
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211108757|gb|FL337429.1|FL337429
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211397106|gb|FL357146.1|FL357146
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|28910315|gb|CB331377.1|CB331377
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|9731382|gb|BE510134.1|BE510134
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTCCTCAAAGTCAACAAGGCTACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211004257|gb|FL327092.1|FL327092
EST:     CAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|120480075|gb|EH210722.1|EH210722
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|31359055|gb|CD443412.1|CD443412
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|14203281|gb|BG836958.1|BG836958
EST:     GGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGCGTGTTTCTCAAAGTCAACAAGGCTACTATTAANCATG-T
genomic: GGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAA-CATGCT
EST: gi|101401382|gb|EB822368.1|EB822368
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211430817|gb|FL361882.1|FL361882
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGKGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|28930957|gb|CB334318.1|CB334318
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTA
EST: gi|211364904|gb|FL335329.1|FL335329
EST:     CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAG                         ATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAA
genomic: CCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 800

TATTAACGCCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTACGCAGGGTTGAGCCATATGTTGCATATGG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 883

TATTAACGCCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTACGCAGGGTTGAGCCATATGTTGCATATGG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 314

TATTAACGCCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTACGCAGGGTTGAGCCATATGTTGCATATGG


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 378

TATTAACGCCATGCACCCTAAGACCAGGAAGATCTTGCAGCTTCTGCGATTGAGGCAGgtgtgttcac ... tttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTACGCAGGGTTGAGCCATATGTTGCATATGG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctgctattataattttgtctgattgtttgtaaaactgaacatttgtttattttagATCTTCAATGGTGTGTTCCTCAAAGTCAACAAGGCGACTATTAACATGCTACGCAGGGTTGAGCCATATGTTGCATATGG
                gtctgat  putative branch site (score: 378)
                                             tttatttt  putative PPT
                                     aacatttgtttatttt  TA-rich tract