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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttgttttgctacaattgcccgttgtaatgtctgtttgtctctgggtaagcacttcattttcgacgttccaaatgtaatttctcaacaaacatctttttctgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC

Basic information

species Zea mays
transcript GRMZM2G074300_T01
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os03g38000.2 (Oryza sativa), 3'ss of exon 3
gtttgttttgctacaattgcccgttgtaatgtctgtttgtctctgggtaagcacttcattttcgacgttccaaatgtaattt----ctcaacaaacatcttt-ttctgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
                              || ||||||  ||     |||||    | | |  |    ||  |||   |||    ||||||  || | ||  || | |  ||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||| || || ||||||||| | |
------------------------------gtttgtttggttcaactcaagcatcgtagtatttaaaaacctcatgatctttttggctcaacgcacttgttcattatcttttgcagGGTGTTCTTGGCATCAAGGTGAAGATCATGCTCGACTGGGACCCCAAGGGCAAGGTTGGCCCGACCACCCCTCTGCCGGATCTTGTAACCATCCATGCTC

upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: PP1S454_3V6.1 (Physcomitrella patens), 3'ss of exon 5
----------------------------------gtttgttttgctacaattgcccgttgtaatgtctgtttgtctctgggtaagcacttcattttcg--acgttccaaatgtaat-ttctcaacaaacatc-----tttttctgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
                                   |  ||||| ||    |   || || || |   ||| |     || || | | |  |||||  |  | | |   | | |    || | ||     |||     | || ||||| |  |||| ||| ||||||||||||| ||||||||||| |||||||| || |||||||||   || || || || || ||||| ||  |||| ||||||||||  |
gtatgttacatatccttggccatttctctgttaactgagtttttctg-gctcttcccttatacttcttgtatcaaattgagttatctcagcatttcggtaatgctttcagtttgccgttgtgaaactgaatcgaagatattgctgtcttctagGGAGTTTTGGGTATCAAGGTCAAGATCATGCTCGACTGGGATCCCAAGGGCAAGCAAGGACCTATGACTCCACTTCCAGATGTGGTCACCATCCATATGC

upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: PP1S41_146V6.1 (Physcomitrella patens), 3'ss of exon 5
---------------------------gtttgttttgctacaattgcccgttgtaatgtctgt--ttgtctctgggtaagcacttcattttcgacgttccaaatgtaatttctcaacaaacatctttttctgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
                             |   | || |    ||||   ||       | ||  |||| |    | ||  |  || ||| | | |||     |    | ||| |  |||  | |  || | |  | ||||||||  |||||||||| || ||||||||||| ||||||||||| |||||||||   || || || ||||||||||| ||  |||| ||||||||||  |
gtttgtcgagcagctattcagtggtgtcctctctgtggtctccttgctgatttctcctacggtctttgttttcaagaaaaaatctcgtttgcaa-gttgtctgtaatgtatcttag-aaatgtttcgttatttttttcagGGTGTATTGGGTATCAAAGTTAAGATCATGCTCGACTGGGACCCAAAGGGCAAGCAAGGACCCATGACCCCTCTTCCAGATGTGGTCACCATCCATATGC

upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: PP1S31_178V6.1 (Physcomitrella patens), 3'ss of exon 5
----------------gtttgttttgctacaattgcccgttgtaatgtctgtttgtctctgggtaagcacttcattttcgacgttccaaatgtaatttctca--acaaacatctttttctg---------tcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
                 ||  | ||| ||   |   |||||  | ||   |||| |       |    | ||||||    | | ||      || ||| | |  || ||  ||   || ||         |  ||||||| ||  |||| |||||||| || ||||||||||||||||||||||||||||||   || || || || || ||||| ||  |||| ||||||||||  |
gtattcttgacagctttttaatcttgttagtctcaaccgtt-cactga--gtttcttcaattattgtgatttcattcggaaggctcgtttattagttttttactacgaatctcaggttttggatgtatgtttttgcagGGAGTGTTGGGCATCAAGGTTAAAATCATGCTTGACTGGGACCCGAAGGGCAAGCAAGGACCTATGACTCCCCTTCCAGATGTGGTTACCATCCATATGC

upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: PP1S29_222V6.1 (Physcomitrella patens), 3'ss of exon 5
------------------------------------gtttgttttgctacaattgcccgttgtaatgtctgt--ttgtctctgggtaagcacttc-attttcgacgttcca--aatgtaatttctcaacaaacatc---------tttttctgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
                                      |  || |||   | |   |     |  | ||  |  |||  |     |||  | ||| ||  | || ||| ||  | |    |  ||| ||  |              | |||  || ||||||| ||  ||||||||||||| ||||||||||| |||||||| || || |||||    || || || || || || || ||  |||| |||||||| |  |
gtattaacagatttttttgatacccctatgtttactcctccttgtgcagaattaatcttcgattgtttccatccttgcattatactaaatagttctataattgaggtttcattattccgttggctctactgagcctgaattgaagctattccttcttgcagGGAGTGTTGGGTATCAAGGTCAAGATCATGCTCGACTGGGATCCCAAAGGCAAACAAGGACCCATGACTCCACTCCCAGATGTGGTTACCATCCACATGC

upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: PP1S487_22V6.1 (Physcomitrella patens), 3'ss of exon 4
---------------------------------gtttgttt-tgctacaa---ttgcccgttgtaatgtctgtttgtctctgggtaagcacttcattttcgacgttccaaatgtaatttctcaacaaacatctttttctgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
                                 |||| ||  ||||| |    |    |  |   |   |  ||  | | |        || |||||||| ||     |||| | |   ||   ||    ||||  | |   |||||||| ||  ||||||||||||||||||| ||||| ||||||||||| |||| ||||   ||  |  | || |  ||||| ||  |||||||||| || |  |
gcacgtgtggacattttttgtctaatggtggctgtttcttcatgctagagacctattacacttctacaacgtttcatgtttttaatgctacatcattttctacag---aaatatgaga-cttgtcagttgtcttcct-tactgtgcagGGAGTATTGGGTATCAAGGTGAAGATTATGCTCGACTGGGACCCCAAGGTCAAGCAAGGATCTGTGACTCTACTTCCAGATGTGGTGACCATTCACATGC

upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: PP1S136_175V6.1 (Physcomitrella patens), 3'ss of exon 5
----gtttgttttgctacaattgcccgttgtaatgtctgtttgtct---ctgggtaagcacttcattttcg----acgttccaaatgtaatttctcaacaaacatcttttt------ctgtcgt--gcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
    ||   | ||  ||   ||    ||  | |  | | | || |    || | |     | || |||| |    |  | || |||  | | | |  ||      ||||||      ||||  |  |||||| ||  |||| |||||||| ||||||||||| ||||||||||| |||||||||   ||||| || ||||||||||| ||  |||| || |||||||  |
gtatgtggatcttcatagtgtttttggtcttcaattttctctgacgatgctagatttcgtcatcgtttttgctctatatacctaatccagtgtattgacgtgttacttttttaattactgttcttggcagGGAGTGTTGGGCATCAAGGTAAAGATCATGCTCGACTGGGACCCAAAGGGCAAGCAAGGCCCCATGACCCCTCTTCCAGATGTGGTTACTATCCATATGC

upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: PP1S127_74V6.1 (Physcomitrella patens), 3'ss of exon 5
gtttgttttgctacaattgcccgtt-gtaatgtctgtttgtctctgggtaagcact---tcattttcgacgttccaaatgtaatttctcaacaaacatctttttctgt---cgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
||               || ||||  |||    || |||    || |  |   | |   | ||  |||  |||||  | || | |    |    |    |  ||  ||     | ||||| || ||||| || ||||||||||||||||| |||||||| || ||||| |||   || || || || || ||||| ||  | ||||| || || |  |
gtacacaagatgcttgatgtccgtcagtagctcctttttcgtactagaaagatattgattgatagtcggtgttcccgaagtgaatctgaagtggaggattactttggtatgtttacagGGCGTGCTGGGCATTAAGGTGAAGATCATGCTCGACTGGGATCCAAAGGGGAAGCAAGGACCCATGACTCCACTTCCCGATGTAGTGACTATTCACATGC

upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: EFJ31038 (Selaginella moellendorffii), 3'ss of exon 5
gtttgttttgctacaattgcccgttgtaatgtctgtttgtctctgggtaagcacttcattttcgacgttccaaatgtaatttctcaacaaacatctttttctgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
                                            | | ||| |||  ||  |    | |    ||  | |||||    || |||    || ||  | |||||| ||| |||| |||||||||||||||||||| |||||||| || |||||||||   || |||   || || || |||||| ||||||| |||||    |
--------------------------------------------gtgcaagaactcgatcgttt-tgatttggatccagtttct----aagcattggattgtgctg-gcagGGGGTTTTGGGGATCAAGGTGAAGATCATGCTGGACTGGGATCCAAAGGGCAAGACCGGGCCGTCGACACCGCTGCCGGACATGGTGACGATCCAAGTAC

upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: EFJ34304 (Selaginella moellendorffii), 3'ss of exon 5
gtttgttttgctacaattgcccgttgtaatgtctgtttgtctctgggtaagcacttcattttcgacgttccaaatgtaatttctcaacaaacatctttttctgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
                                            |   ||| |||  ||  |    | |    ||  | ||||| | ||      || | ||| |  |||||| ||| |||| |||||||||||||||||||| |||||||| || |||||||||   || |||   || || || |||||| ||||||| |||||    |
--------------------------------------------gtacaagaactcgatcattt-tgatttggatccagtttctaagcat-tggattgtgctggctggcagGGGGTTTTGGGGATCAAGGTGAAGATCATGCTGGACTGGGATCCAAAGGGCAAGACCGGGCCGTCGACACCGCTGCCGGACATGGTGACGATCCAAGTAC

upper sequence: GRMZM2G074300_T03 (Zea mays), 3'ss of exon 3
lower sequence: EFJ34676 (Selaginella moellendorffii), 3'ss of exon 5
gtttgttttgctacaattgcccgttgtaatgtctgtttgtctctgggtaagcacttcattttcgacgttccaaatgtaatttctcaacaaacatctttttctgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
                                            | | ||| |||  ||  |    | |    ||  | ||||| | ||      || |||||    |||||| ||| |||| |||||||||||||||||||| |||||||| || |||||||||   || |||   || || || |||||| ||||||| |||||    |
--------------------------------------------gtgcaagaactcgatcgttt-tgatttggatccagtttctaagcat-tggattgttctg----gcagGGGGTTTTGGGGATCAAGGTGAAGATCATGCTGGACTGGGATCCAAAGGGCAAGACCGGGCCGTCGACACCGCTGCCGGACATGGTGACGATCCAAGTAC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|28361609|gb|CB239965.1|CB239965
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|76017326|gb|DT944496.1|DT944496
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|148999968|gb|EE037043.2|EE037043
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|71304431|gb|DR788336.1|DR788336
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|149083927|gb|EE173304.2|EE173304
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|28361791|gb|CB240147.1|CB240147
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|78121892|gb|DV540276.1|DV540276
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|21988014|gb|BQ779542.1|BQ779542
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTTTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|91057136|gb|EB167554.1|EB167554
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|60343353|gb|DN210326.1|DN210326
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|88753248|gb|DY537389.1|DY537389
EST:     CTCCTCAGACAG                         GGTGTTTTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|31998117|gb|CD661932.1|CD661932
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|211264443|gb|FL070946.1|FL070946
EST:     CAGTGAATGAGTACATCGACTYAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|4886195|gb|AI677315.1|AI677315
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|18177081|gb|BM378291.1|BM378291
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|76284526|gb|DV024094.1|DV024094
EST:     AGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCCTC-GACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTG
genomic: AGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCC-TCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTG
EST: gi|27521990|gb|CA989096.1|CA989096
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTTTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|22542258|gb|BU092696.1|BU092696
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|32848633|gb|CD988314.1|CD988314
EST:     ACATTGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: ACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|211507270|gb|FL197054.1|FL197054
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GNTGTTCTGGGGTATCA-GGTGAAGATCATGCTTGACTGGGACCCGAAAGG
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGG-TATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGG
EST: gi|60395599|gb|DN228469.1|DN228469
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|71436918|gb|DR817968.1|DR817968
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|67015398|gb|CO444147.1|CO444147
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGANAGG-
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGA-AGGG
EST: gi|149044287|gb|EE047535.2|EE047535
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTTTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|5455784|gb|AI833474.1|AI833474
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|22715617|gb|BU197866.1|BU197866
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|211507274|gb|FL197058.1|FL197058
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCC
EST: gi|211264444|gb|FL070947.1|FL070947
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|71770189|gb|DR968126.1|DR968126
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|113702981|gb|EE680485.1|EE680485
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|4886094|gb|AI677214.1|AI677214
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|5439322|gb|AI820243.1|AI820243
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|211516715|gb|FL197112.1|FL197112
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGGATCAAGGGTGA-GATCATGCTTGACTGGGACC-GNAAGG
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGG-TGAAGATCATGCTTGACTGGGACCCG-AAGG
EST: gi|28568922|gb|CB280797.1|CB280797
EST:     CCGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTTTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|110523710|gb|EE027894.1|EE027894
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|89251253|gb|DY623039.1|DY623039
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|74241306|gb|DT649220.1|DT649220
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|9732270|gb|BE511022.1|BE511022
EST:     CATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|29576817|gb|CB616929.1|CB616929
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|76280736|gb|DV020304.1|DV020304
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTTTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|211357463|gb|FL472121.1|FL472121
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|211129665|gb|FL448923.1|FL448923
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|15053893|gb|BI359438.1|BI359438
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|211377531|gb|FL197007.1|FL197007
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGG-TATCAAGGTGAAGATCATGCTTGACTGGGA
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGA
EST: gi|211286416|gb|FL307757.1|FL307757
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|94480031|gb|EB708989.1|EB708989
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|110195743|gb|EC877640.1|EC877640
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTTTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|29946514|gb|CB816187.1|CB816187
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|211507268|gb|FL197052.1|FL197052
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACC
EST: gi|149109486|gb|EE190225.2|EE190225
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAAATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|91871102|gb|EB401244.1|EB401244
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTTTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|67020703|gb|CO449452.1|CO449452
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTNCTCAGACAG                         GGTGTNCTGGGTATCAAAGGTGAANATCATGCTTGACTGGGACCCNAAGGG
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAA-GGTGAAGATCATGCTTGACTGGGACCCGAAGGG
EST: gi|74233864|gb|DT641778.1|DT641778
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|37397371|gb|CF635983.1|CF635983
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|30031573|gb|CB833424.1|CB833424
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|31664617|gb|CD573550.1|CD573550
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAN                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGG
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGG
EST: gi|37397796|gb|CF636206.1|CF636206
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|211289717|gb|FL361719.1|FL361719
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAG--C
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|71439153|gb|DR820203.1|DR820203
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|110532862|gb|EE037042.1|EE037042
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|111193194|gb|EE291330.1|EE291330
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTTTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|60356933|gb|DN223906.1|DN223906
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|67013922|gb|CO442671.1|CO442671
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|149069758|gb|EE158144.2|EE158144
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|211509642|gb|FL197077.1|FL197077
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAGGGTGAAGATCATGCTTGACTGGGAACCGAAAGGG
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAA-GGG
EST: gi|71436667|gb|DR817717.1|DR817717
EST:     CGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|29129878|gb|CB380582.1|CB380582
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|89251839|gb|DY623625.1|DY623625
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|6127310|gb|AW129835.1|AW129835
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|88752356|gb|DY536497.1|DY536497
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGG
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGG-
EST: gi|33101603|gb|CF061563.1|CF061563
EST:     GTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: GTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|78026439|gb|DV494826.1|DV494826
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|76280737|gb|DV020305.1|DV020305
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|149105751|gb|EE291331.2|EE291331
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|60347205|gb|DN214178.1|DN214178
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|22543011|gb|BU093449.1|BU093449
EST:     CAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|71304430|gb|DR788335.1|DR788335
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|78108620|gb|DV527038.1|DV527038
EST:     CACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|148981803|gb|EE027895.2|EE027895
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|148961778|gb|EE012555.2|EE012555
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|33096193|gb|CF056187.1|CF056187
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|113589011|gb|DW753808.1|DW753808
EST:     AATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: AATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|149044418|gb|EE047536.2|EE047536
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|74233592|gb|DT641506.1|DT641506
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|22546706|gb|BU099017.1|BU099017
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATC
EST: gi|29130998|gb|CB381702.1|CB381702
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGC
EST: gi|89248143|gb|DY619929.1|DY619929
EST:     CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAG                         GGTGTTCTGGGGATCAAGGTGAAGATCATGCTTGACTGGGACCCG
genomic: CAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 940

AGCCAAGTCCATGAAGTTCAAGGATGGCTACATGATCTCATCTGGTCAGCCAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 488

AGCCAAGTCCATGAAGTTCAAGGATGGCTACATGATCTCATCTGGTCAGCCAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 496

AGCCAAGTCCATGAAGTTCAAGGATGGCTACATGATCTCATCTGGTCAGCCAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 353

AGCCAAGTCCATGAAGTTCAAGGATGGCTACATGATCTCATCTGGTCAGCCAGTGAATGAGTACATCGACTCAGCTGTGAGACACGTCCTCCTCAGACAGgtttgttttg ... tgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cattttcgacgttccaaatgtaatttctcaacaaacatctttttctgtcgtgcagGGTGTTCTGGGTATCAAGGTGAAGATCATGCTTGACTGGGACCCGAAGGGCAAGGTTGGCCCGATCACCCCTCTTCCGGACCTGGTGACCATCCATACCC
                                   catctttttctgtc  CT-rich tract
               aaatgtaattt  TA-rich tract