1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...gtcaattcttacagtttgcatagtttgttgaatgtacttttacttttaccgtagtacaatgctcataatgtagaatactgtaaccagtttgcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
species | Zea mays |
transcript | GRMZM2G050961_T02 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|148943634|gb|EC888698.2|EC888698
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|211482968|gb|FK973427.1|FK973427
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGNTGGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTAEST: gi|15198996|gb|BI423600.1|BI423600
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGG-AAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTA
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|148943633|gb|EC888697.2|EC888697
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|166466537|gb|EG225135.1|EG225135
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: AGATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|29577011|gb|CB617123.1|CB617123
genomic: AGATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|19058136|gb|BM736803.1|BM736803
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|211061029|gb|FL204116.1|FL204116
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGCGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|6342692|gb|AW165516.1|AW165516
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAG-CATCAATGCTTATGAGEST: gi|29167933|gb|CB411193.1|CB411193
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|15499585|gb|BI596098.1|BI596098
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAA GATCTCTTCTCAGACATCAATGCTTATGAGEST: gi|19058714|gb|BM737381.1|BM737381
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GNTCTCTTCTCAGACATCAATGCTTATGAGGTGGAGCTTGEST: gi|13382241|gb|BG458916.1|BG458916
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAGGTGGAGCTTG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|29947167|gb|CB816515.1|CB816515
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|211058063|gb|FL204109.1|FL204109
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|32849976|gb|CD989657.1|CD989657
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|13558470|gb|BG549826.1|BG549826
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|6431818|gb|AW172022.1|AW172022
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGNGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|13237244|gb|BG355258.1|BG355258
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|29544990|gb|CB605168.1|CB605168
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAGEST: gi|26559456|gb|CA831691.1|CA831691
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
EST: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAG GTTCTCTTCTCAGACATCAATGCTTATGAG
genomic: ATTCTATCGATCGGTGCTGAAGTCAGTGAAGTTGAGGCTGGGAAGAAGgtaaggaaca ... gcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
ttaccgtagtacaatgctcataatgtagaatactgtaaccagtttgcacttgcagGTTCTCTTCTCAGACATCAATGCTTATGAG
ctgtaac putative branch site (score: 3)
ataatgta TA-rich tract