1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...gttttgtttatctttccttaatatggtatactaatcgtgctggcagaggcatactgtgctctttatggccttacctcaccttttgcttgttgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGAAGACGAAACAGAAACTGGAATGGGCTGAAAAGCAGCGCGAAGCGAATC
species | Zea mays |
transcript | GRMZM2G031825_T05 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|32799175|gb|CD951411.1|CD951411
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|84976888|gb|DW475310.1|DW475310
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: GGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|32857618|gb|CD997299.1|CD997299
genomic: GGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|32930530|gb|CF035342.1|CF035342
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|74233977|gb|DT641891.1|DT641891
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|60357818|gb|DN224791.1|DN224791
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|32930224|gb|CF035036.1|CF035036
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|71773157|gb|DR971070.1|DR971070
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|71430487|gb|DR811537.1|DR811537
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|67033911|gb|CO462660.1|CO462660
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|7138069|gb|AW499414.1|AW499414
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACCCTGGAGCCAGAGAATGAGEST: gi|60345729|gb|DN212702.1|DN212702
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|34391313|gb|CF384541.1|CF384541
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|211460283|gb|FL454155.1|FL454155
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|211048852|gb|FL416946.1|FL416946
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|76285780|gb|DV025348.1|DV025348
genomic: TCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|32800109|gb|CD952345.1|CD952345
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|51592666|gb|CV071812.1|CV071812
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCGTGCTGACCCTGGAGCCAEST: gi|86466772|gb|DY233142.1|DY233142
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCA
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|13516080|gb|BG518356.1|BG518356
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATTGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAEST: gi|60346352|gb|DN213325.1|DN213325
genomic: TACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCA-TGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGA
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|28982871|gb|BQ538319.2|BQ538319
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|71429897|gb|DR810947.1|DR810947
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGEST: gi|32826625|gb|CD966303.1|CD966303
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
EST: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAG TACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
genomic: TTACACTGGGTTCGCTGCCAAAGTCAACCCGAGTTTACTGTGGGCATGAGgtacaatctc ... tgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAG
gaggcatactgtgctctttatggccttacctcaccttttgcttgttgagttgcagTACACTGTGAAGAACCTAAAATTCATGCTGACACTGGAGCCAGAGAATGAGAAGACGAAACAGAAACTGGAATGGGCTGAAAAGCAGCGCGAAGCGAATC
acctcac putative branch site (score: 3)
tctttat TA-rich tract