1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtaagccttaactatttttatttcagtattactattactgctgcagatgtttattattcatggcattgacgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTTTGCAACAGTTGCATGATTCACTTCATTCGAAA
species | Zea mays |
transcript | GRMZM2G010823_T01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|211324568|gb|FL223785.1|FL223785
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATEST: gi|211324561|gb|FL223778.1|FL223778
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTAT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|78111379|gb|DV529776.1|DV529776
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|211324571|gb|FL223788.1|FL223788
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGEST: gi|149089384|gb|EE178623.2|EE178623
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGG
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|149001505|gb|EE038811.2|EE038811
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|211326730|gb|FL223797.1|FL223797
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: AAATGACCATGTGGATAGGTCACAATCCTTCAA-TGATACATTTCCCACT GTTATGCATATAGEST: gi|211324562|gb|FL223779.1|FL223779
genomic: AAATGACCATGTGAATAGGTCACAATC-TTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAG
EST: AAATGGAC-ATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACG GGAATGCATATAGCEST: gi|211326731|gb|FL223798.1|FL223798
genomic: AAATG-ACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGC
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTEST: gi|148951891|gb|EC897665.2|EC897665
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|211324567|gb|FL223784.1|FL223784
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|32798032|gb|CD950268.1|CD950268
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTAAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|211326725|gb|FL223792.1|FL223792
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGEST: gi|211324570|gb|FL223787.1|FL223787
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTG
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|32797316|gb|CD949552.1|CD949552
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTAAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|211324572|gb|FL223789.1|FL223789
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATAACATTCGAGGEST: gi|211324569|gb|FL223786.1|FL223786
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATA-CATTCGAGG
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|91877250|gb|EB407207.1|EB407207
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|211326737|gb|FL223804.1|FL223804
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGEST: gi|211324565|gb|FL223782.1|FL223782
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGG
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTEST: gi|211326729|gb|FL223796.1|FL223796
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
EST: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACT GTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
genomic: CAAATGACCATGTGAATAGGTCACAATCTTCAAATGATACATTTCCCACTgtaagcctta ... acgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGT
cagtattactattactgctgcagatgtttattattcatggcattgacgtttccagGTAATGCATATAGCGACGGCCGTTGAGATACATTCGAGGTTTATCCCAAGTTTGCAACAGTTGCATGATTCACTTCATTCGAAA
cattgac putative branch site (score: 351)
cgtttcc CT-rich tract
atgtttattattcat TA-rich tract