Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...caccatacctgaaaactttattgcattacactgaaatgtagtgttttgttcttatcagatgcctttggtttctgaagttatacacgactttgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGTGTCCGCAGGTCTCAGGAAATGCTGTGAAGGAGGAACATGGGGGAGTTGA

Basic information

species Zea mays
transcript GRMZM2G007276_T01
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G007276_T01 (Zea mays), 3'ss of exon 4
lower sequence: LOC_Os05g38550.2 (Oryza sativa), 3'ss of exon 5
--caccatacctgaaaactttattgcattac-actgaaatgtagtgttttgttcttatcagatgcctttggtttctgaagttatacacgactttgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGTGTCCGCAGGTCTCAGGAAATGCTGTGAAGG---AGGAACATGGGGGAGTTGA
   |  |      |  |||| ||| | | ||  |  ||| ||| | || ||||  ||| |  | |     || |     |  ||    |    ||   ||||||||||||||||||| ||| |||| || |||||||| |||||||| |    ||| || |  || ||||||||||| |||| |   |||| ||   ||| |    
tctagaagtttctagtacttcattccttcactgcaaaaacgta-tattctgtttctattactttctgaacgtgtgctttgaaatttgtggtgctgg--tgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATTGTTCGTAAATCACAGGAAATGCTCTGAAAGATAAGGAGCACAAGGGGGA---

upper sequence: GRMZM2G007276_T01 (Zea mays), 3'ss of exon 4
lower sequence: GLYMA13G40990.1 (Glycine max), 3'ss of exon 5
caccatacctgaaaacttt---attgcattacactgaaatgtagtgttttgttcttatcagatgcctttggtttctgaagttata-cacgactttgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGTGTCCGCAGGTCTCAGGAAATGCTGTGAAGGAGGAACATGGGGGAGTTGA-
|   | |  | |||   |    | ||| | |  ||  |  ||     | | || || | |||    |    ||||| |   | |  || ||  ||   ||||||||||| |||||||| | | | ||||| ||||||||||||||||| | |||||| || | ||| || |||||| |||||   |  | | |||          
ctttacagattaaagtgtatgaagtgcttcaatctcgacagtttaaatatattattttgagagagtt----tttcttagactgtgtcatgatcttatgttgcagAAGGAGTGGAGAGATAGGAGAGATGAATTCAAGAAGAAGGTTAGCCGATGTGTGCGGAAGTCACAAGAAATGTTGTGATTTAC-AGCTTGGATTCTCATCT

upper sequence: GRMZM2G007276_T01 (Zea mays), 3'ss of exon 4
lower sequence: GLYMA11G14980.1 (Glycine max), 3'ss of exon 5
caccatacctgaaaactttattgcattacactgaaatgtagtgttttgttcttatc----agatgcctttggtttctgaagttatacacgactttgcc-ttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGTGTCCGCAGGTCTCAGGAAATGCTGTGAAG-GAGGAACATGGGGGAGTTGA
       |||  ||      ||     |   |   ||||  |  ||  | | ||      |  | | |||| ||| |   |   |  | ||  |||   ||||||||||| |||||||| | | ||||||| |||||||| |||||||| | ||| ||  | | ||| || |||||| |||||   |  |   |||    |     
-----ggcctacaagagcctttttgacatttttgtatgtcatccttgatacctagtctgaaagttcttttgatttgttctgacctgtatgatcttggtattgcagAAGGAGTGGAGAGATAGGAGGGATGATTTCAAGAAAAAGGTTAGCCGATGCGTAAGGAAGTCACAAGAAATGTTGTGATTCGTCGCCTATGCCTCATACT-

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18174032|gb|BM349420.1|BM349420
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|16922884|gb|BM075876.1|BM075876
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18176640|gb|BM351573.1|BM351573
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18175663|gb|BM350894.1|BM350894
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18168302|gb|BM338142.1|BM338142
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|24769301|gb|CA404430.1|CA404430
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18166689|gb|BM336528.1|BM336528
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|60337599|gb|DN204572.1|DN204572
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|31354462|gb|CD438819.1|CD438819
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTTTTGTAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|76916346|gb|DV166343.1|DV166343
EST:     GCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: GCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18171101|gb|BM340941.1|BM340941
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|28984790|gb|BQ539212.2|BQ539212
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18169841|gb|BM339681.1|BM339681
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|16925159|gb|BM078227.1|BM078227
EST:     CAATGCTCTCTAGTCCGAATGACGAATCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|16920481|gb|BM074677.1|BM074677
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18168775|gb|BM338615.1|BM338615
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18174179|gb|BM349567.1|BM349567
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|6654285|gb|AW267690.1|AW267690
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|94478519|gb|EB707477.1|EB707477
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|78074574|gb|DV503008.1|DV503008
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|86470794|gb|DY237164.1|DY237164
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18172247|gb|BM347635.1|BM347635
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18173372|gb|BM348760.1|BM348760
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|6527105|gb|AW216317.1|AW216317
EST:     CAATGCTCTCTAGTCCGAATGCCGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18171575|gb|BM341415.1|BM341415
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18180978|gb|BM382188.1|BM382188
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18168569|gb|BM338409.1|BM338409
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18165129|gb|BM334968.1|BM334968
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|4572991|gb|AI586640.1|AI586640
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18163967|gb|BM333806.1|BM333806
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCCAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|16919167|gb|BM074068.1|BM074068
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18172986|gb|BM348374.1|BM348374
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|32840342|gb|CD980023.1|CD980023
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|45846859|gb|CN070802.1|CN070802
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18167757|gb|BM337597.1|BM337597
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18167433|gb|BM337272.1|BM337272
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|16927470|gb|BM080539.1|BM080539
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18164311|gb|BM334150.1|BM334150
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18162617|gb|BM332456.1|BM332456
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|6403332|gb|AW171807.1|AW171807
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|88749489|gb|DY533630.1|DY533630
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|28986463|gb|CB351150.1|CB351150
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|16926031|gb|BM079099.1|BM079099
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|4630550|gb|AI621424.1|AI621424
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|67038183|gb|CO464513.1|CO464513
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|211096126|gb|FL442448.1|FL442448
EST:     CGATGCTCTCTAGTCCGAATGAAGAGTTTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGGGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|88755883|gb|DY540024.1|DY540024
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18175654|gb|BM350889.1|BM350889
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18167677|gb|BM337517.1|BM337517
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|16922561|gb|BM075629.1|BM075629
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|86470638|gb|DY237008.1|DY237008
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18169905|gb|BM339745.1|BM339745
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|9953723|gb|BE640306.1|BE640306
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|28984547|gb|BQ539151.2|BQ539151
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18174727|gb|BM350115.1|BM350115
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18173203|gb|BM348591.1|BM348591
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18171467|gb|BM341307.1|BM341307
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18162234|gb|BM332073.1|BM332073
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|40336181|gb|CK370251.1|CK370251
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|32839946|gb|CD979627.1|CD979627
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|8383338|gb|BE056281.1|BE056281
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|16918596|gb|BM073819.1|BM073819
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|14244579|gb|BG840133.2|BG840133
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|5005651|gb|AI711713.1|AI711713
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|31558118|gb|CD527330.1|CD527330
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|32937267|gb|CF042086.1|CF042086
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         CCGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18166297|gb|BM336136.1|BM336136
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18172888|gb|BM348276.1|BM348276
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|78119968|gb|DV538352.1|DV538352
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|16925088|gb|BM078156.1|BM078156
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|51592942|gb|CV072088.1|CV072088
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|91052024|gb|EB162442.1|EB162442
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|4804574|gb|AI665597.2|AI665597
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|17931724|gb|BM268684.1|BM268684
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|37390413|gb|CF632436.1|CF632436
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
EST: gi|18171105|gb|BM340945.1|BM340945
EST:     CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCC                         AAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT
genomic: CAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcac ... tgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgttcttatcagatgcctttggtttctgaagttatacacgactttgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGTGTCCGCAGGTCTCAGGAAATGCTGTGAAGGAGGAACATGGGGGAGTTGA
                                          ctttgcctt  CT-rich tract
                             aagttata  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
caccatacctgaaaactttattgcattacactgaaatgtagtgttttgttcttatcagatgcctttggtttctgaagttatacacgactttgccttgcagAAGGATTGGAGAGAGAAGCGGGATGAGTTCAAGAAGAAGGTTAGGCAATGTGTCCGCAGGTCTCAGGAAATGCTGTGAAGGAGGAACATGGGGGAGTTGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA
- ccatacc
- - - - - - - - - - ttgcatt
- - - - - - - - - - - - - - cactgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - -cagatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tttctga