1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' | 31 5' 3' | 32 5' 3' | 33 5' 3' |
gttctgcgtttcagcttttatgcttataaaagaagtttctgccttttttttgtctattgtaactccggggctttatacaacaaatgcagtagtggcctgacatgtgcatttttgtcttgttagGTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAGGGCATTTCAGGGAACCATCTTTTTATTGGCATCATAGTAATAACAGTTA
species | Zea mays |
transcript | GRMZM2G391042_T01 |
intron # | 30 |
splice site | 3' |
intron type | U2 |
EST: CAGATAAAGTGAAAAATACCTTCATATTCAACACATTTGTTCTCTGCCAG GTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAGEST: gi|31351725|gb|CD436082.1|CD436082
genomic: CAGATAAAGTGAAAAATACCTTCATATTCAACACATTTGTTCTCTGCCAGgttctgcgtt ... gtcttgttagGTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAG
EST: CAGATAAAGTGAAAAATACCTTCATATTCAACACATTTGTTCTCTGCCAG GTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAGEST: gi|5650127|gb|AI920487.1|AI920487
genomic: CAGATAAAGTGAAAAATACCTTCATATTCAACACATTTGTTCTCTGCCAGgttctgcgtt ... gtcttgttagGTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAG
EST: GATAAAGTGAAAAATACCTTCATATTCAACCCATTTGTTCTCTGCCAG GTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAGEST: gi|67018575|gb|CO447324.1|CO447324
genomic: GATAAAGTGAAAAATACCTTCATATTCAACACATTTGTTCTCTGCCAGgttctgcgtt ... gtcttgttagGTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAG
EST: CAGATAAAGTGAAAAATACCTTCATATTCAACACATTTGTTCTCTGCCAG GTGTTCAACGAGTTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAGEST: gi|31350948|gb|CD435305.1|CD435305
genomic: CAGATAAAGTGAAAAATACCTTCATATTCAACACATTTGTTCTCTGCCAGgttctgcgtt ... gtcttgttagGTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAG
EST: CAGATAAAGTGAAAAATACCTTCATATTCAACACATTTGTTCTCTGCCAG GTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAG
genomic: CAGATAAAGTGAAAAATACCTTCATATTCAACACATTTGTTCTCTGCCAGgttctgcgtt ... gtcttgttagGTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAG
ggctttatacaacaaatgcagtagtggcctgacatgtgcatttttgtcttgttagGTGTTCAACGAATTCAATTCACGTAAACCAGATGAGCTGAATATATTCAAGGGCATTTCAGGGAACCATCTTTTTATTGGCATCATAGTAATAACAGTTA
gcctgac putative branch site (score: 145)
tttttgtctt putative PPT
atttttgt TA-rich tract