1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaagttcatttgtagtttgcagtctgagtttttttttcctgcttcattcctgggatttgagaaataataattaacatcacaataattgtgaacttgcttttaagaacaatcccatttctatatagattaatcatcagccctgctttgcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCAGTGAGTACTCTATGCAGGCGTACAAACGATATGGTGTTGTAAAGGGTTC
species | Zea mays |
transcript | GRMZM5G819212_T02 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AAAGATTTTRGAGTCAATATGGCACTATCCATGCTAAAATTCTYACAAAC GAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCEST: gi|211269504|gb|FL311290.1|FL311290
genomic: AAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTT-ACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGC
EST: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAAC GAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCAEST: gi|78074191|gb|DV502625.1|DV502625
genomic: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCA
EST: GATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAAC GAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCAEST: gi|21809854|gb|BQ668172.1|BQ668172
genomic: GATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCA
EST: GCTAAAATTTTACAAAC GAGAAATATCCCCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCAEST: gi|211390914|gb|FL318343.1|FL318343
genomic: GCTAAAATTTTACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCA
EST: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAAC GAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCAEST: gi|211135169|gb|FL439581.1|FL439581
genomic: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCA
EST: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAAC GAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCAEST: gi|211286457|gb|FL309059.1|FL309059
genomic: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCA
EST: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAAATTTACAAAC GAGAAATATCACCTTTACTACCTTEST: gi|6918525|gb|AW400055.1|AW400055
genomic: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTT
EST: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAAC GAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCAEST: gi|33467473|gb|CF244522.1|CF244522
genomic: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCA
EST: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAAC GAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCAEST: gi|211336107|gb|FL367026.1|FL367026
genomic: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCA
EST: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAAC GAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCAEST: gi|37381402|gb|CF627583.1|CF627583
genomic: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCA
EST: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAAC GAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCA
genomic: CAAAGATTTTGGAGTCAATATGGCACTATCCATGCTAAAATTTTACAAACgtaagttcat ... gcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCA
aagaacaatcccatttctatatagattaatcatcagccctgctttgcgtgaacagGAGAAATATCACCTTTACTACCTTCAAGCTGCCGATATGTACCAACTTGCAGTGAGTACTCTATGCAGGCGTACAAACGATATGGTGTTGTAAAGGGTTC
gattaat putative branch site (score: 3)
atttctatatagatta TA-rich tract