1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...actcttgtcactgccccaggcctgcctttctactagcatcccctctacattgacagttctatgctttggccaactaaatgaactttacatcctcttgcagGTTCAGAATTTGATAGAGCGTTGTCTACAGCTCTACATGAACAAAGGAGAAGTTGTTAGAACTCTTTCTACTCGTGCTAGAATAGAACCTGGCTTCACTA
species | Zea mays |
transcript | GRMZM5G816784_T03 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CTGTAGCTAGTAATGACAATAAGAAGGTGTCTCGCGAAGATATTGAACTT GTTCAGAATTTGATAGAGCGTTGTCTACAGCTCTACATGAACAAAGGAGAAEST: gi|211440032|gb|FK972557.1|FK972557
genomic: CTGTAGCTAGTAATGACAATAAGAAGGTGTCTCGCGAAGATATTGAACTTgtaagctttc ... cctcttgcagGTTCAGAATTTGATAGAGCGTTGTCTACAGCTCTACATGAACAAAGGAGAA
EST: CTGTAGCTAGTAATGACAATAAGAAGGTGTCTCGCKAAGATATTGAACTT GTTCAGAATTTGATAGAGCGTTGTCTACAGCTCTACATGAACAAAGGAGAAEST: gi|74236845|gb|DT644759.1|DT644759
genomic: CTGTAGCTAGTAATGACAATAAGAAGGTGTCTCGCGAAGATATTGAACTTgtaagctttc ... cctcttgcagGTTCAGAATTTGATAGAGCGTTGTCTACAGCTCTACATGAACAAAGGAGAA
EST: CTGTAGCTAGTAATGACAATAAGAAGGTGTCTCGCGAAGATATTGAACTT GTTCAGAATTTGATAGAGCGTTGTCTACAGCTCTACATGAACAAAGGAGAAEST: gi|211440029|gb|FK972554.1|FK972554
genomic: CTGTAGCTAGTAATGACAATAAGAAGGTGTCTCGCGAAGATATTGAACTTgtaagctttc ... cctcttgcagGTTCAGAATTTGATAGAGCGTTGTCTACAGCTCTACATGAACAAAGGAGAA
EST: CTGTAGCTAGTAATGACAATAAGAAGGTGTCTCGCGAAGATATTGAACTT GTTCA-AATTTGATAGAGCGTTGTCTACAGCTCTACATGAACAAAGGAGAA
genomic: CTGTAGCTAGTAATGACAATAAGAAGGTGTCTCGCGAAGATATTGAACTTgtaagctttc ... cctcttgcagGTTCAGAATTTGATAGAGCGTTGTCTACAGCTCTACATGAACAAAGGAGAA
tacattgacagttctatgctttggccaactaaatgaactttacatcctcttgcagGTTCAGAATTTGATAGAGCGTTGTCTACAGCTCTACATGAACAAAGGAGAAGTTGTTAGAACTCTTTCTACTCGTGCTAGAATAGAACCTGGCTTCACTA
aactaaa putative branch site (score: 78)
ctttacatcctctt putative PPT
aactaaat TA-rich tract