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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgatactaccgatgctcgaattttttatggtacttatttttacaatcaaataatgattgttgttaacctcttgaatgtgattattttcagGATCT

Basic information

species Zea mays
transcript GRMZM2G482077_T01
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atttttacaatcaaataatgattgttgttaacctcttgaatgtgattattttcagGATCT
                         tgttaac  putative branch site (score: 2)
                                             ttattttc  putative PPT
        aatcaaataatgatt  TA-rich tract