1 5' 3' | 2 5' 3' | 3 5' 3' |
gtagtccaacctattcactactgtttctttcagccatggataccttcccgtgcatgcgctcaaccgacgttccatgcctgcagGTGGCCTCCTCTTCAAGGTGGGCAACAGCAACATGCAGCACGTGACGTCGCTCTCCTTCCTGCTCCTCGTCTACTCCAACTACCTCAGCCACGCCGACGC
species | Zea mays |
transcript | GRMZM2G455642_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CAGCCTCCTGCCGGGCATCTCCGGCCACCCACAGATCCAGTACTCGCCGG GTGGCCTCCTCTTCAAGGTGGGCAACAGCAACATGCAGCACGTGACGEST: gi|9255369|gb|BE345837.1|BE345837
genomic: CAGCCTCCTGCCGGGCATCTCCGGCCACCCACAGATCCAGTACTCGCCGGgtagtccaac ... atgcctgcagGTGGCCTCCTCTTCAAGGTGGGCAACAGCAACATGCAGCACGTGACG
EST: CAGCCTCCTGCCGGGCATCTCCGGCCACCCACAGATCCAGTACTCGCCGG GTGGCCTCCTCTTCAAGGTGGGCAACAGCAACATGCAGCACGTGACGTCGC
genomic: CAGCCTCCTGCCGGGCATCTCCGGCCACCCACAGATCCAGTACTCGCCGGgtagtccaac ... atgcctgcagGTGGCCTCCTCTTCAAGGTGGGCAACAGCAACATGCAGCACGTGACGTCGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtagtccaacctattcactactgtttctttcagccatggataccttcccgtgcatgcgctcaaccgacgttccatgcctgcagGTGGCCTCCTCTTCAAGGTGGGCAACAGCAACATGCAGCACGTGACGTCGCTCTCCTTCCTGCTCCTCGTCTACTCCAACTACCTCAGCCACGCCGACGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC