1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...ttttttcccttaatctcctcacatgttatcttcagtccatacatgactcaaccttttatttgctgactacaaagttctttcttctgttcttctgttctagGGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGTACCAAAGTGGCAACATTACACATGTATGACTGGATTATACTTTTATGTC
species | Zea mays |
transcript | GRMZM2G447433_T08 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ATCTGAACCAGCGCAGTTTATCAGGGACGTAGCACTGTAGCAGTGAGTTG GGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGTEST: gi|211211372|gb|FL470796.1|FL470796
genomic: ATCTGAACCAGCGCAGTTTATCAGGGACGTAGCACTGTAGCAGTGAGTTGgtgagctctc ... tctgttctagGGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGT
EST: ATCTGAACCAGCGCAGTTTATCAGGGACGTAGCACTGTAGCAGTGAGTTG GGGAGGATGCCTGATATCCAACTGGGATGCCACACTATAAGGTCCCATGGTEST: gi|71439499|gb|DR820549.1|DR820549
genomic: ATCTGAACCAGCGCAGTTTATCAGGGACGTAGCACTGTAGCAGTGAGTTGgtgagctctc ... tctgttctagGGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGT
EST: ATCTGAACCAGCGCAGTTTATCAGGGACGTAGCACTGTAGCAGTGAGTTG GGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGTEST: gi|78114830|gb|DV533218.1|DV533218
genomic: ATCTGAACCAGCGCAGTTTATCAGGGACGTAGCACTGTAGCAGTGAGTTGgtgagctctc ... tctgttctagGGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGT
EST: ATCTGAACCAGCGCAGTTTATCAGGGACGTAGCACTGTAGCAGTGAGTTG GGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGTEST: gi|101397320|gb|EB820583.1|EB820583
genomic: ATCTGAACCAGCGCAGTTTATCAGGGACGTAGCACTGTAGCAGTGAGTTGgtgagctctc ... tctgttctagGGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGT
EST: ATCTGAACCAGCGCAGTTTATCAGGGACGTAGCACTGTAGCAGTGAGTTG GGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGT
genomic: ATCTGAACCAGCGCAGTTTATCAGGGACGTAGCACTGTAGCAGTGAGTTGgtgagctctc ... tctgttctagGGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGT
actcaaccttttatttgctgactacaaagttctttcttctgttcttctgttctagGGGAGGATGCCTGATATCCAGCTGGGATGCCACACTATAAGGTCCCATGGTACCAAAGTGGCAACATTACACATGTATGACTGGATTATACTTTTATGTC
tgctgac putative branch site (score: 2)
ttctttcttctgttct putative PPT
ttttattt TA-rich tract