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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgttcagtcattatgatcgccctcgtattgcttagctgtgtgaaaaggctgggttgtacttgcgagCCCTCCAG

Basic information

species Zea mays
transcript GRMZM2G430947_T01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G430947_T01 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA01G38580.1 (Glycine max), 3'ss of exon 16
------------------------------------------------------gtatgttcagtcattatgatcgccctcgtattgcttagct-gtgtgaaaaggctggg--ttgtacttgcgagCCCTCCAG---------------------------------------------------------------------
                                                       ||| || ||   || |      |    | || | |   |  | |  |    ||||   ||   |||| || |  ||||                                                                      
gttctttttattttctgtgccattatctctgtccctgaactgaatcagatggtgatatatttagatttttttcaaatctcaattttccatgttttatttttagGTTCTGGAAATTAATCTTGTGACCTTTCCAAATGTTGCTGATGCTATATTGGCCAATGGCATGTTCAGTCATTATGATCGCCCACGTATTGGACAACTAT