Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...taacactaaatgggtggtacatgatgaaaaccttactatgttttttctccaaaggagcgtgccattcagttgtctgattttgctttccctgaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGGCTGGAGATGGGCCAATGTCCACTTGCGAAATCTTATAGGGCATTAAGTG

Basic information

species Zea mays
transcript GRMZM2G394410_T01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G394410_T01 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os10g43060.1 (Oryza sativa), 3'ss of exon 3
-taacactaaatgggtggtacatgatgaaaaccttactatgttttttctccaaaggagcgtgccattcagttgtctgattttgctttccctgaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGGCTGGAGATGGGCCAATGTCCACTTGCGAAATCTTATAGGGCATTAAGTG------
 || | ||| || || || |||  |  |  |   |   |||  |  | |    |     ||   |    ||   || | | || || |  ||  |||||||||   ||| |||||||| ||      |||||||||||||||||| ||||||||||| ||||| ||||| || || || || || || |||||||||||||      
ctatccctagatagggggaacactaaaatgaagatggaatgaatggttttaccatattggtagtaagaggtgcacttaatctgatt-ctttggtatttcagAACGGAGGTCAGCCTAATAA------CCATGAAGCACTGAGCAATGAGTGGCTGGAAATGGGTCAATGCCCCCTGGCAAAGTCGTACAGGGCATTAAGTGGTGTCG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|76014968|gb|DT942138.1|DT942138
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|76925550|gb|DV170479.1|DV170479
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTGACAATAACAACCAT
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCAT
EST: gi|50325381|gb|CO520507.1|CO520507
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|76291618|gb|DV031186.1|DV031186
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|76930321|gb|DV172337.1|DV172337
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|32841346|gb|CD981027.1|CD981027
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|76281948|gb|DV021516.1|DV021516
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACA
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACA
EST: gi|76018078|gb|DT945248.1|DT945248
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|91871803|gb|EB401760.1|EB401760
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|89760965|gb|DY689166.1|DY689166
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|33100155|gb|CF060115.1|CF060115
EST:     AGTGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|32841591|gb|CD981272.1|CD981272
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|76280469|gb|DV020037.1|DV020037
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|32841104|gb|CD980785.1|CD980785
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|74241488|gb|DT649402.1|DT649402
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|91878188|gb|EB408145.1|EB408145
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|78114180|gb|DV532569.1|DV532569
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|33100439|gb|CF060399.1|CF060399
EST:     AGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|32841031|gb|CD980712.1|CD980712
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|78073863|gb|DV502297.1|DV502297
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|76919522|gb|DV167759.1|DV167759
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|89764283|gb|DY691146.1|DY691146
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|32841265|gb|CD980946.1|CD980946
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|91053007|gb|EB163425.1|EB163425
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|211118088|gb|FL110975.1|FL110975
EST:     GCCGCA-TAAGAAAA-CTCCCACAAGAAGA-CCCCAACAACCTCCCCCAG                         AATAA-GGCCAGCCTAACA
genomic: GC-GCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACA
EST: gi|32840910|gb|CD980591.1|CD980591
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|32841114|gb|CD980795.1|CD980795
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|32841073|gb|CD980754.1|CD980754
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|71769244|gb|DR967181.1|DR967181
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|211118086|gb|FL110973.1|FL110973
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|32841024|gb|CD980705.1|CD980705
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|76284557|gb|DV024125.1|DV024125
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|76920838|gb|DV168333.1|DV168333
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
EST: gi|32841678|gb|CD981359.1|CD981359
EST:     AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAG                         AATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG
genomic: AGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 43 (upstream exon), 48 (downstream exon)
Score: 26

CAGTCTATCTGCATTTGGAGGGTTTTTCAGCTTTGGTGACTTCTCAAATAAGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGGCTGGAGATGGGCCAATGTCCACTTGCGAAATCTTATAGGGCATTAAGTG


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 229

CAGTCTATCTGCATTTGGAGGGTTTTTCAGCTTTGGTGACTTCTCAAATAAGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGGCTGGAGATGGGCCAATGTCCACTTGCGAAATCTTATAGGGCATTAAGTG


Block sizes: 48 (upstream exon), 48 (downstream exon)
Score: 246

CAGTCTATCTGCATTTGGAGGGTTTTTCAGCTTTGGTGACTTCTCAAATAAGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGGCTGGAGATGGGCCAATGTCCACTTGCGAAATCTTATAGGGCATTAAGTG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 391

CAGTCTATCTGCATTTGGAGGGTTTTTCAGCTTTGGTGACTTCTCAAATAAGCGCAATAAGAAAAACTCCAACAAGAAGAACCCCAACAACCTCCCCCAGgtaaattgag ... gaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGGCTGGAGATGGGCCAATGTCCACTTGCGAAATCTTATAGGGCATTAAGTG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctccaaaggagcgtgccattcagttgtctgattttgctttccctgaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGGCTGGAGATGGGCCAATGTCCACTTGCGAAATCTTATAGGGCATTAAGTG
                          gtctgat  putative branch site (score: 391)
                                ttttgctttccctg  CT-rich tract
                                            tgaaattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
taacactaaatgggtggtacatgatgaaaaccttactatgttttttctccaaaggagcgtgccattcagttgtctgattttgctttccctgaaatttcagAATAAAGGCCAGCCTAACAATAACAACCATGAAGCACTGAGCAACGAGTGGCTGGAGATGGGCCAATGTCCACTTGCGAAATCTTATAGGGCATTAAGTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
-aacacta
- - - - - - - - gtacatg
- - - - - - - - - - - -atgaaaac
- - - - - - - - - - - - - - - - - - - tgttttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - gcgtgcc