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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatctgcaatccacgtcatattccatgaatcgatttgtacacaccccatacgtacatgcggcatgctaagctttccttctgttggttattacgaattaatatgcctggaagctaggagattaattaacaagtaaatcatagatggttaattttatgctatattctagttacatttcgtctctatttatgcagAATCATACTACTCCCATAA

Basic information

species Zea mays
transcript GRMZM2G377217_T02
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atagatggttaattttatgctatattctagttacatttcgtctctatttatgcagAATCATACTACTCCCATAA
      ggttaat  putative branch site (score: 4)
                                   tttcgtctctattt  putative PPT
        ttaattttatgctata  TA-rich tract