1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtatttaatttgctctgaactcctattcctgcagctcttgatataaacatttatcgatgatatctcatgttgaagctacttctttggcagATTTTTAGAACACTCGGCACACCTAATGAGAAGATTTGGCCTGGCTATGCTAAATTACCAGGTGTGAAAGTAAATTTTGTTAAACAACC
species | Zea mays |
transcript | GRMZM2G179097_T05 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CAGAGTTTTTAC-GCTAGATAAG ATTTTTAGAACACTCGGCACACCTAATGAGAAGATTTGGCCTTTCTATCCTEST: gi|6020498|gb|AW065426.1|AW065426
genomic: CAGAGTTTGAACAGCTAGATAAGgtatttaatt ... tctttggcagATTTTTAGAACACTCGGCACACCTAATGAGAAGATTTGGCCTGGCTATGCT
EST: CCAAAGAACCGGTATTCAATGGAAAAACAGAGTTTGAACAGCTAGATAAG ATTTTTAGAACACTCGGCACACCTAATGAGAAEST: gi|211055687|gb|FL451729.1|FL451729
genomic: CCAAAGAACCGTTATTCAATGGAAAAACAGAGTTTGAACAGCTAGATAAGgtatttaatt ... tctttggcagATTTTTAGAACACTCGGCACACCTAATGAGAA
EST: CCAAAGAACCGTTATTCAATGGAAAAACAGAGTTTGAACAGCTAGATAAG ATTTTTAGAACACTCGGCACACCTAATGAGAAGATTTGGCCTGGCTATGCT
genomic: CCAAAGAACCGTTATTCAATGGAAAAACAGAGTTTGAACAGCTAGATAAGgtatttaatt ... tctttggcagATTTTTAGAACACTCGGCACACCTAATGAGAAGATTTGGCCTGGCTATGCT
tcttgatataaacatttatcgatgatatctcatgttgaagctacttctttggcagATTTTTAGAACACTCGGCACACCTAATGAGAAGATTTGGCCTGGCTATGCTAAATTACCAGGTGTGAAAGTAAATTTTGTTAAACAACC
tcttgat putative branch site (score: 4)
ctacttcttt putative PPT
atataaacatttat TA-rich tract