1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...tgctgtatgccagtaccatgtgctattcttgtttcctttcaaaaattaatggtagattgaagttatgtcagggttcctattttttatgtaattcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGTGGTGCCAGACAGCCAACAATGCTCTCTCCCTTTTGTCTACAAATGATA
species | Zea mays |
transcript | GRMZM2G165418_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|19436843|gb|BM953253.1|BM953253
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGGTCAACAGGATCAAGEST: gi|18649538|gb|BM498357.1|BM498357
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTGGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGGTCAACAGGATCAAGEST: gi|31352864|gb|CD437221.1|CD437221
genomic: GCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|211384019|gb|FL015614.1|FL015614
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|78112474|gb|DV530868.1|DV530868
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|149076328|gb|EE164942.2|EE164942
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|50332602|gb|CO527728.1|CO527728
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|148945029|gb|EC890213.2|EC890213
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|211386655|gb|FL015628.1|FL015628
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: CACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAAACCTGAGEST: gi|9732635|gb|BE511387.1|BE511387
genomic: CACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAA-CCTGAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|211384022|gb|FL015617.1|FL015617
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|71419454|gb|DR804774.1|DR804774
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|211384023|gb|FL015618.1|FL015618
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|19822590|gb|BQ048614.1|BQ048614
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGGTCAACAGGATCAAGEST: gi|149084056|gb|EE173454.2|EE173454
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|19822589|gb|BQ048613.1|BQ048613
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGGTCAACAGGATCAAGEST: gi|19057676|gb|BM736343.1|BM736343
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGGTCAACAGGATCAAGEST: gi|211386656|gb|FL015629.1|FL015629
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|211384020|gb|FL015615.1|FL015615
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGEST: gi|211386650|gb|FL015623.1|FL015623
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
EST: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAG TTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
genomic: GACACCCAGAGTTCCGCTACAAAACTGAATTTCAGAGTCATGAACCTGAGgttaataagc ... attcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAG
ttaatggtagattgaagttatgtcagggttcctattttttatgtaattcttgtagTTTGACTACCTCAAAAGTTTGGAAATAGAGGAAAAGATCAACAGGATCAAGTGGTGCCAGACAGCCAACAATGCTCTCTCCCTTTTGTCTACAAATGATA
aattaat putative branch site (score: 3)
ttcttgt putative PPT
tattttttatgtaatt TA-rich tract