1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gttagtacccagcaaaaaatttgttggttacattatttatgagatttttgttaactttctcttgttatgtgtttattcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGACCCAACTGAAGTGATTCGCAAAGCTGTGCTGCGCATGCTTCCCCGCAAC
species | Zea mays |
transcript | GRMZM2G163473_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211065317|gb|FL151272.1|FL151272
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: NGTGTTWCAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATEST: gi|60343511|gb|DN210484.1|DN210484
genomic: -GTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCAT
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068078|gb|FL151284.1|FL151284
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211498775|gb|FL140826.1|FL140826
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|60347040|gb|DN214013.1|DN214013
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|148938736|gb|EC883069.2|EC883069
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|76015937|gb|DT943107.1|DT943107
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211284264|gb|FL053254.1|FL053254
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|60397634|gb|DN230450.1|DN230450
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068072|gb|FL151278.1|FL151278
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068080|gb|FL151286.1|FL151286
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAA-GGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|74241943|gb|DT649857.1|DT649857
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068074|gb|FL151280.1|FL151280
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|60354692|gb|DN221665.1|DN221665
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|37361133|gb|CF602422.1|CF602422
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|19822368|gb|BQ048392.1|BQ048392
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211065321|gb|FL151276.1|FL151276
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|88752119|gb|DY536260.1|DY536260
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGCCCAGATGGAGAAAGAEST: gi|148999745|gb|EE036748.2|EE036748
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|5398715|gb|AI812180.1|AI812180
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068083|gb|FL151289.1|FL151289
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|9731724|gb|BE510476.1|BE510476
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|60348718|gb|DN215691.1|DN215691
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|87156387|gb|DY401176.1|DY401176
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211065316|gb|FL151271.1|FL151271
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|149071926|gb|EE160312.2|EE160312
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|148973081|gb|EE024144.2|EE024144
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|78112053|gb|DV530449.1|DV530449
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|19770416|gb|BQ035137.1|BQ035137
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068084|gb|FL151290.1|FL151290
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211284263|gb|FL053253.1|FL053253
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|60349978|gb|DN216951.1|DN216951
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTTGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|149083441|gb|EE172763.2|EE172763
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211282461|gb|FL053248.1|FL053248
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|76281753|gb|DV021321.1|DV021321
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|32907178|gb|CF011991.1|CF011991
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|60357091|gb|DN224064.1|DN224064
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068076|gb|FL151282.1|FL151282
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211065322|gb|FL151277.1|FL151277
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068086|gb|FL151292.1|FL151292
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068085|gb|FL151291.1|FL151291
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|60344047|gb|DN211020.1|DN211020
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|22713642|gb|BU197415.1|BU197415
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|60395778|gb|DN228648.1|DN228648
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|26559331|gb|CA831566.1|CA831566
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211070812|gb|FL151294.1|FL151294
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|60342646|gb|DN209619.1|DN209619
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211070811|gb|FL151293.1|FL151293
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|149077053|gb|EE165709.2|EE165709
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|148973082|gb|EE024145.2|EE024145
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211468041|gb|FL459168.1|FL459168
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|74237945|gb|DT645859.1|DT645859
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAGAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|32858018|gb|CD997699.1|CD997699
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|37420605|gb|CF647997.1|CF647997
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211282457|gb|FL053244.1|FL053244
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068073|gb|FL151279.1|FL151279
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|78118041|gb|DV536428.1|DV536428
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|60342547|gb|DN209520.1|DN209520
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|78026238|gb|DV494625.1|DV494625
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|37400998|gb|CF637860.1|CF637860
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTCACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068075|gb|FL151281.1|FL151281
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|149077054|gb|EE165710.2|EE165710
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211065315|gb|FL151270.1|FL151270
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|56382613|gb|CV985282.1|CV985282
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|76928535|gb|DV171658.1|DV171658
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211068079|gb|FL151285.1|FL151285
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|78105659|gb|DV524077.1|DV524077
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTACTGGCATACAGGgttagtaccc ... tcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
attatttatgagatttttgttaactttctcttgttatgtgtttattcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGACCCAACTGAAGTGATTCGCAAAGCTGTGCTGCGCATGCTTCCCCGCAAC
tgttaac putative branch site (score: 223)
tttattccc putative PPT
atttttgttaacttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttagtacccagcaaaaaatttgttggttacattatttatgagatttttgttaactttctcttgttatgtgtttattcccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGACCCAACTGAAGTGATTCGCAAAGCTGTGCTGCGCATGCTTCCCCGCAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC