1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaaaggacctattccgggagaaataactattgataggtttaacctccaagtgaaggaaggaggcatggagcagtttctttgtgaatccaaacatattctgtaaaagcgctctttaaagtgtccttacttgaagtgcagGTGATGGAAAAGAGCAATTTTAACATAGTAAATGACGATGAGGTTGAACTTGCTCATTCTGGACAATATCTGTTGAATCTTCCCATTAAAGTTGATGAAT
species | Zea mays |
transcript | GRMZM2G161168_T02 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CTGAGGAAATCGACACGCTTGAGCAGAACTTCCTGTCCTATTTCTTTCGG GTGATGGAAAAGAGCAATTTTAEST: gi|26557524|gb|CA829759.1|CA829759
genomic: CTGAGGAAATCGACACGCTTGAGCAGAACTTCCTGTCCTATTTCTTTCGGgtaaaggacc ... tgaagtgcagGTGATGGAAAAGAGCAATTTTA
EST: CTGAGGAAATCGACACGCTTGAGCAGAACTTCCTGTCCTATTTCTTTCGG GTGATGGAAAAGAGCAATTTTAACATAGTAAATGACGATGEST: gi|93015466|gb|EB640986.1|EB640986
genomic: CTGAGGAAATCGACACGCTTGAGCAGAACTTCCTGTCCTATTTCTTTCGGgtaaaggacc ... tgaagtgcagGTGATGGAAAAGAGCAATTTTAACATAGTAAATGACGATG
EST: CTGAGGAAATCGACACGCTTGAGCAGAACTTCCTGTCCTATTTCTTTCGG GTGATGGAAAAGAGCAATTTTAACATAGTAAATGACGATGAGGTTGAACTT
genomic: CTGAGGAAATCGACACGCTTGAGCAGAACTTCCTGTCCTATTTCTTTCGGgtaaaggacc ... tgaagtgcagGTGATGGAAAAGAGCAATTTTAACATAGTAAATGACGATGAGGTTGAACTT
aatccaaacatattctgtaaaagcgctctttaaagtgtccttacttgaagtgcagGTGATGGAAAAGAGCAATTTTAACATAGTAAATGACGATGAGGTTGAACTTGCTCATTCTGGACAATATCTGTTGAATCTTCCCATTAAAGTTGATGAAT
tccttac putative branch site (score: 37)
tccttactt CT-rich tract
aaacatatt TA-rich tract