1 5' 3' | 2 5' 3' | 3 5' 3' |
gtgagctatctactgacatgcagtcctcttgtgaagtttatattacttactgtgccacgtgtgtaatacatgctttacgtcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTATTACTGTCCTGAACTCTGGGTGGTCGTCTAGTTGCAATGTCATAATTAT
species | Zea mays |
transcript | GRMZM2G151252_T02 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|32943820|gb|CF048639.1|CF048639
genomic: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGCGGTGTCAAGAAG ACCAAGGCTGGTGATGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|18650073|gb|BM498892.1|BM498892
genomic: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: CGTGGTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|32804188|gb|CD956424.1|CD956424
genomic: CGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: GATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGATGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|60397878|gb|DN230694.1|DN230694
genomic: GATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|14206819|gb|BG840497.1|BG840497
genomic: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAG ACCAA-GCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|113789340|gb|DW909149.1|DW909149
genomic: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: GAAGATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|14621547|gb|BI142308.1|BI142308
genomic: GAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|113615885|gb|DW781332.1|DW781332
genomic: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: GTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATACTTTCTGTEST: gi|14244546|gb|BG840675.2|BG840675
genomic: GTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATA-TTTCTGT
EST: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|93013351|gb|EB638871.1|EB638871
genomic: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTTTGTAEST: gi|32864175|gb|CF003857.1|CF003857
genomic: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: AAATGAAAGAGCGGAAGAACAGGTCCAAGAAGATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGATGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|37391783|gb|CF633135.1|CF633135
genomic: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|15499601|gb|BI596114.1|BI596114
genomic: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTAEST: gi|166676541|gb|EG291966.1|EG291966
genomic: AAATGAAAGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
EST: AGAAGATCCGTGGTGTCAAGAAG ACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
genomic: AGAAGATCCGTGGTGTCAAGAAGgtgagctatc ... tcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTA
agtttatattacttactgtgccacgtgtgtaatacatgctttacgtcttttacagACCAAGGCTGGTGACGCCAAGAAGAAGTAAACAGTCATTTATATTTCTGTATTACTGTCCTGAACTCTGGGTGGTCGTCTAGTTGCAATGTCATAATTAT
tacttac putative branch site (score: 1)
cgtctttt putative PPT
atattactta TA-rich tract