1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaatcatcgcttgcctttagcttttggtgcctactgttctgtgcgcccgtcccgtgtactgtgtagtcactgagatgaaaacctgtgctgtattcgtgtggacccattcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTCCAGGATTCTG
species | Zea mays |
transcript | GRMZM2G149576_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|71769068|gb|DR967005.1|DR967005
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|93283801|gb|EB676065.1|EB676065
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|78111899|gb|DV530296.1|DV530296
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCTTTCTACA-GGGCATTCTGATGTGGAGGGAGGAGTEST: gi|32841700|gb|CD981381.1|CD981381
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCAATCTGATGTGGAGGGAGGAGTEST: gi|211463999|gb|FL174252.1|FL174252
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGAATTCTGATGTGGGAGGGAGGAGEST: gi|211469060|gb|FL174280.1|FL174280
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGG-AGGGAGGAG
EST: ATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCCTCT-CGTAG GCACCTCGTCGAGATCCTTCTACAAGGGAATTCTGATGTGGAAGGGAGGAEST: gi|211469055|gb|FL174275.1|FL174275
genomic: ATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCC-TCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGA-GGGAGGA
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGAATTCTGATGTGGAGGGAGGAGAEST: gi|50323960|gb|CO519086.1|CO519086
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|78104608|gb|DV523026.1|DV523026
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|211074549|gb|FL187269.1|FL187269
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|211082767|gb|FL187308.1|FL187308
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAAATCCTTCTA-AAGGGCATTCTGATGGGGAAGGGAGGAGEST: gi|211080033|gb|FL187299.1|FL187299
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGA-GGGAGGAG
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAA GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGEST: gi|76013549|gb|DT940719.1|DT940719
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATG
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|93282425|gb|EB674689.1|EB674689
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|91052631|gb|EB163049.1|EB163049
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|71772906|gb|DR970829.1|DR970829
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCG--- -CACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|148945370|gb|EC890591.2|EC890591
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|32840339|gb|CD980020.1|CD980020
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCAATCTGATGTGGAGGGAGGAGTEST: gi|211071816|gb|FL187258.1|FL187258
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTEST: gi|211074546|gb|FL187266.1|FL187266
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTT
EST: ATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTANG GCACCTCGTCGAGATCCTTCTACAGGGGCATTCTGATGTGGGAAGGAGGGEST: gi|211466533|gb|FL174266.1|FL174266
genomic: ATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTA-Ggtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGG-AGGGAGG-
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACA-GGGAATTCTGATGTGGAGGGAGGAGAEST: gi|148945267|gb|EC890477.2|EC890477
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|78082192|gb|DV510604.1|DV510604
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|149081592|gb|EE170734.2|EE170734
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|149106747|gb|EE188643.2|EE188643
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|211466522|gb|FL174255.1|FL174255
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGEST: gi|71769874|gb|DR967811.1|DR967811
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCG
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|211082765|gb|FL187306.1|FL187306
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: ATCTTCCCATACTGGGCTAATCACTGGCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACA-GGGCATTCTGATGGGGAAGGGAG-AGEST: gi|149081259|gb|EE170373.2|EE170373
genomic: ATCTTCCCATACTGG-CTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGA-GGGAGGAG
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|211469061|gb|FL174281.1|FL174281
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAA GCACCTCGTCGAGATCCTTCTACAAGGAAATTCTGATGTGEST: gi|211082764|gb|FL187305.1|FL187305
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTG
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGGAGGGAGGAGEST: gi|211469054|gb|FL174274.1|FL174274
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGG-AGGGAGGAG
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGG-ATTCTGATGTGGAGGGEST: gi|149076796|gb|EE165445.2|EE165445
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGG
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAEST: gi|211071812|gb|FL187254.1|FL187254
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACC-TCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGA
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAN GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATEST: gi|211077292|gb|FL187283.1|FL187283
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGAT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAAGGGGAGGAEST: gi|13237072|gb|BG355086.1|BG355086
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGA-GGG-AGGA
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|211077290|gb|FL187281.1|FL187281
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: ATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCCTCT-CGTAG GCACCTCGTCGAGATCCTTCTACA-GGGCATTCTGATGTGGAGGGAGGGAEST: gi|149081528|gb|EE170664.2|EE170664
genomic: ATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCC-TCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGG-A
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|211074544|gb|FL187264.1|FL187264
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|13237258|gb|BG355272.1|BG355272
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|149106424|gb|EE188313.2|EE188313
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|93284314|gb|EB676578.1|EB676578
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|149001890|gb|EE038842.2|EE038842
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|211082769|gb|FL187310.1|FL187310
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCEST: gi|76917339|gb|DV166774.1|DV166774
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCC
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|78088725|gb|DV517118.1|DV517118
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|71763997|gb|DR961934.1|DR961934
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|211071814|gb|FL187256.1|FL187256
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGGAGGGAGGAGEST: gi|89762580|gb|DY690104.1|DY690104
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGG-AGGGAGGAG
EST: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTEST: gi|211082768|gb|FL187309.1|FL187309
genomic: CATCTTCCCATACTGGCTAATCACTGTCCTCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGT
EST: ATCTTCCCATACTGGCTAATCACTGTCCCTCAT-ATAATCCTCTTCGTAG GCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGGAGGGAGGAG
genomic: ATCTTCCCATACTGGCTAATCACTGTCC-TCATTATAATCCTCTTCGTAGgtaatcatcg ... ttcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGG-AGGGAGGAG
tgtagtcactgagatgaaaacctgtgctgtattcgtgtggacccattcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTCCAGGATTCTG
cccattc CT-rich tract
atgaaaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaatcatcgcttgcctttagcttttggtgcctactgttctgtgcgcccgtcccgtgtactgtgtagtcactgagatgaaaacctgtgctgtattcgtgtggacccattcattgcagGCACCTCGTCGAGATCCTTCTACAAGGGCATTCTGATGTGGAGGGAGGAGTCCAGGATTCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG