1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtcagtacacattgctgcgagaaataactctagttagttaatgtatctagcgagtttttgagctaacacgtagttttcaattcaatcaaaacatgaagAGGCACTACGTTTCCTCAGCTAGGGAGCTAGTAAGACTCAACGGAACAACAAAGGCACCTGTAATGAACTATGCATCAGAATCAATTCTCGGTGTGGTGA
species | Zea mays |
transcript | GRMZM2G145446_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AAGTCCTGGTTGGAGCGATCCCAGTTGCTGTCACCATGATATATGTTCAG AGGCACTACGTTTCCTCAGCTAGGGAGCTAGTAAGACTCAACGGAACAACAEST: gi|32842169|gb|CD981850.1|CD981850
genomic: AAGTCCTGGTTGTAGCGATCCCAGTTGTTGTCACCATGATATATGTTCAGgtcagtacac ... aaacatgaagAGGCACTACGTTTCCTCAGCTAGGGAGCTAGTAAGACTCAACGGAACAACA
EST: AAGTCCTGGTTGTAGCGATCCCAGTTGCTGTCACCATGATATATGTTCAG AGGCACTACGTTTCCTCAGCTAGGGAGCTAGTAAGACTCAACGGAACAACAEST: gi|101387130|gb|EB815582.1|EB815582
genomic: AAGTCCTGGTTGTAGCGATCCCAGTTGTTGTCACCATGATATATGTTCAGgtcagtacac ... aaacatgaagAGGCACTACGTTTCCTCAGCTAGGGAGCTAGTAAGACTCAACGGAACAACA
EST: CGATCCCAGTTGCTGTCACCATGATATATGTTCAG AGGCACTACGTTTCCTCAGCTAGGGAGCTAGTAAGACTCAACGGAACAACAEST: gi|32843324|gb|CD983005.1|CD983005
genomic: CGATCCCAGTTGTTGTCACCATGATATATGTTCAGgtcagtacac ... aaacatgaagAGGCACTACGTTTCCTCAGCTAGGGAGCTAGTAAGACTCAACGGAACAACA
EST: AAGTCCTGGTTGTAGCGATCCCAGTTGCTGTCACCATGATATATGTTCAG AGGCACTACGTTTCCTCAGCTAGGGAGCTAGTAAGACTCAACGGAACAACA
genomic: AAGTCCTGGTTGTAGCGATCCCAGTTGTTGTCACCATGATATATGTTCAGgtcagtacac ... aaacatgaagAGGCACTACGTTTCCTCAGCTAGGGAGCTAGTAAGACTCAACGGAACAACA
tatctagcgagtttttgagctaacacgtagttttcaattcaatcaaaacatgaagAGGCACTACGTTTCCTCAGCTAGGGAGCTAGTAAGACTCAACGGAACAACAAAGGCACCTGTAATGAACTATGCATCAGAATCAATTCTCGGTGTGGTGA
agctaac putative branch site (score: 5)
ttttcaatt TA-rich tract