1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gcaagatttacatttcacatttctatgcttttcttatcaaagcagaagcagcatgtgtaatctggtagaacctttggctctgacatatgttcatattttcttctaacaatctttttggttgcagCTAACCTGTGGAATATGTTTTGAAGGGTATTCTTCTGATACGATGAGCTCTGCTGGTTGTGCTCATTTTTATTGCCATGAATGTTGGGAAG
species | Zea mays |
transcript | GRMZM2G143644_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ACTGTTGGCTTACTTTTGAATGGAAATCATGAGCCCGGCTCTAGGAAG CTAACCTGTGGAATATGTTTTGAAGGGTATTCTTCTGATACGATGAGCTCTEST: gi|211233382|gb|FL465909.1|FL465909
genomic: ACTGTTGGCTTACTTTTGAATGGAAATCATGAGCCCGGCTCTAGGAAGgcaagattta ... ttggttgcagCTAACCTGTGGAATATGTTTTGAAGGGTATTCTTCTGATACGATGAGCTCT
EST: ATACTGTTGGCTTACTTTTGAATGGAAATCATGAGCCCGGCTCTAGGAAG CTAACCTGTGGAATATGTTTTGAAGGGTATTCTTCTGATACGATGAGCTCTEST: gi|101399525|gb|EB821630.1|EB821630
genomic: ATACTGTTGGCTTACTTTTGAATGGAAATCATGAGCCCGGCTCTAGGAAGgcaagattta ... ttggttgcagCTAACCTGTGGAATATGTTTTGAAGGGTATTCTTCTGATACGATGAGCTCT
EST: ATACTGTTGGCTTACTTTTGAATGGAAATCATGAGCCCGGCTCTAGGAAG CTAACCTGTGGGATATGTTTTGAAGGGTATTCTTCTGATACGATGAGCTCT
genomic: ATACTGTTGGCTTACTTTTGAATGGAAATCATGAGCCCGGCTCTAGGAAGgcaagattta ... ttggttgcagCTAACCTGTGGAATATGTTTTGAAGGGTATTCTTCTGATACGATGAGCTCT
acctttggctctgacatatgttcatattttcttctaacaatctttttggttgcagCTAACCTGTGGAATATGTTTTGAAGGGTATTCTTCTGATACGATGAGCTCTGCTGGTTGTGCTCATTTTTATTGCCATGAATGTTGGGAAG
ttctaac putative branch site (score: 109)
tcttttt putative PPT
atatgttcatatttt TA-rich tract