1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtatgatgctagcttatgatgtcgttcaaaatgacattggagatgtgatgagtccagacttataaccttggcattcttatatgataatgttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGGAAGCTGCTGTTGCCCCTGAGTTTGCCGCAATCACTGATTACCAAGGAG
species | Zea mays |
transcript | GRMZM2G126821_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|211398272|gb|FL293836.1|FL293836
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTGCAAATGAGGGGCACTATTCCTCCCTGGGCACCAAGTGGGAGGGCATG GGGGGATTTGTTCTTTCTCCGGGGACCCACAAGGAAGCAAAGGAEST: gi|33101681|gb|CF061641.1|CF061641
genomic: T-GCAGATGAGGGGCACTAT-CCTCCCTGGGCAC-AAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGG-ATTTGTTCTT-CTACAGGGACCCAGA-GGAAGCAAAGGA
EST: TCTGCAGATGAGGGGCACTATCCTCCCTGGGCACCAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCGGGAGGAGEST: gi|30306590|gb|CD001263.1|CD001263
genomic: TCTGCAGATGAGGGGCACTATCCTCCCTGGGCAC-AAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|31349731|gb|CD434088.1|CD434088
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|32850981|gb|CD990662.1|CD990662
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTTGATCTGTTCTTCTACAGAGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|30307128|gb|CD001801.1|CD001801
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|211208070|gb|FL437181.1|FL437181
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|6538929|gb|AW225068.1|AW225068
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|148940170|gb|EC884930.2|EC884930
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|31362453|gb|CD446810.1|CD446810
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|110481295|gb|EE011014.1|EE011014
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TCTGCAGATGAGGGGCACTATCCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTTTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|31355003|gb|CD439360.1|CD439360
genomic: TCTGCAGATGAGGGGCACTAT-CCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGNGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|149014518|gb|EE044147.2|EE044147
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|5510808|gb|AI857192.1|AI857192
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|211518207|gb|FL037244.1|FL037244
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|30307129|gb|CD001802.1|CD001802
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|87151812|gb|DY396601.1|DY396601
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAAGTCATG GTGGATTTGTTCTTCTACAEST: gi|211540690|gb|FL218505.1|FL218505
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACA
EST: TCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATNG GTGGGTTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAEST: gi|148965698|gb|EE016561.2|EE016561
genomic: TCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCAT-Ggtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGA
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTAEST: gi|30032245|gb|CB834096.1|CB834096
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTA
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|61118621|gb|DN559582.1|DN559582
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|32849968|gb|CD989649.1|CD989649
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTTGATCTGTTCTTCTACAGAGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|31353313|gb|CD437670.1|CD437670
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|18964153|gb|BM660841.1|BM660841
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GNGGATTGGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|31353712|gb|CD438069.1|CD438069
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|148959151|gb|EE010618.2|EE010618
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAAGAGEST: gi|60351487|gb|DN218460.1|DN218460
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|149014517|gb|EE044146.2|EE044146
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|67037375|gb|CO464213.1|CO464213
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGANGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTTGATCTGNTCTTCTACAGAGACCCAGAGGAAGCAAAGGAGCAGGGAG-AEST: gi|211211019|gb|FL456131.1|FL456131
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGG-AGGA
EST: TTCTGCARATGAGGGGCACTATCCTCCCTGGGCMCAAGTGGGAGGTCATG GTGGATTTGTTYTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|31355252|gb|CD439609.1|CD439609
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGNGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|19770436|gb|BQ035157.1|BQ035157
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|28987078|gb|CB351453.1|CB351453
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|31353393|gb|CD437750.1|CD437750
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGNGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|29543918|gb|CB604298.1|CB604298
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|149081112|gb|EE170216.2|EE170216
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|24768430|gb|CA403559.1|CA403559
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|148981763|gb|EE027869.2|EE027869
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGEST: gi|149095196|gb|EE180817.2|EE180817
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|60351254|gb|DN218227.1|DN218227
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|67028726|gb|CO457475.1|CO457475
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGNGCACAAGTGGGAGGTCATG GTTGATCTGTTCTTCTACAGAGACCCAGAGGAAGCAAAGGAGCANGGAGGAEST: gi|149108470|gb|EE292795.2|EE292795
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCA-GGAGGA
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|88757934|gb|DY542075.1|DY542075
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|31353757|gb|CD438114.1|CD438114
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|12972713|gb|BG268119.1|BG268119
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCCAGAGGAAGCAAAGGAGCAGGAGGAEST: gi|21330457|gb|BQ485838.1|BQ485838
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCC-AGAGGAAGCAAAGGAGCAGGAGGA
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAEST: gi|31355761|gb|CD440118.1|CD440118
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCA
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGNGCACAAGTGGGAGGTCATG GTGGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAEST: gi|83279186|gb|DV943194.1|DV943194
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGG-ATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGA
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTAGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGEST: gi|149082244|gb|EE171430.2|EE171430
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
EST: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATG GTGGATTTGTTCTTCTACAGGGACCCAGAGGGAGCAAAGGAGCAGGAGGAG
genomic: TTCTGCAGATGAGGGGCACTATCCTCCCTGGGCACAAGTGGGAGGTCATGgtatgatgct ... ttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAG
gtgatgagtccagacttataaccttggcattcttatatgataatgttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGGAAGCTGCTGTTGCCCCTGAGTTTGCCGCAATCACTGATTACCAAGGAG
ttataac putative branch site (score: 596)
attcttatatgataat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatgatgctagcttatgatgtcgttcaaaatgacattggagatgtgatgagtccagacttataaccttggcattcttatatgataatgttgtttgcagGTGGATTTGTTCTTCTACAGGGACCCAGAGGAAGCAAAGGAGCAGGAGGAGGAAGCTGCTGTTGCCCCTGAGTTTGCCGCAATCACTGATTACCAAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG