1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagtggaattatctgttcccgtaacaattgcactgttttcttgtaaaataaaccatagttttgtttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAATTTTATGTGTTCCTTTCCCGTACCAGAAATCTGCAAAG
species | Zea mays |
transcript | GRMZM2G115049_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211069746|gb|FL326276.1|FL326276
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: GAAGCACAACAATGTGACTGTGGATGTGAAAGGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTEST: gi|211067138|gb|FL332478.1|FL332478
genomic: GAAGCACAACAATGTGACTGTGGATGTGAAAG-CAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTT
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211118967|gb|FL349445.1|FL349445
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211282848|gb|FL309040.1|FL309040
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|60349522|gb|DN216495.1|DN216495
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|149083876|gb|EE173252.2|EE173252
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|71314453|gb|DR793854.1|DR793854
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|101387379|gb|EB815705.1|EB815705
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211455059|gb|FL323071.1|FL323071
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|71436182|gb|DR817232.1|DR817232
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211463261|gb|FL358480.1|FL358480
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGNGGATGTGAAAGCAACTTCAGAATCAAAT GNGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211462556|gb|FL333206.1|FL333206
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|15545704|gb|BI643498.1|BI643498
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|149014219|gb|EE043774.2|EE043774
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|149081524|gb|EE170660.2|EE170660
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|149108403|gb|EE292740.2|EE292740
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|76282636|gb|DV022204.1|DV022204
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211455392|gb|FL341711.1|FL341711
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211505801|gb|FL357190.1|FL357190
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|84351536|gb|DW245941.1|DW245941
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|91056164|gb|EB166582.1|EB166582
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211500080|gb|FL310132.1|FL310132
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|89764236|gb|DY691118.1|DY691118
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|29130483|gb|CB381187.1|CB381187
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|76917796|gb|DV167007.1|DV167007
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|71303230|gb|DR787717.1|DR787717
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|37424398|gb|CF649931.1|CF649931
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|101395788|gb|EB819821.1|EB819821
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211095737|gb|FL312081.1|FL312081
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|9794381|gb|BE552689.1|BE552689
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|71448665|gb|DR829715.1|DR829715
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|32909156|gb|CF013968.1|CF013968
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|74241152|gb|DT649066.1|DT649066
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|71430935|gb|DR811985.1|DR811985
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|148963152|gb|EE014121.2|EE014121
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|149080662|gb|EE169719.2|EE169719
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|32906855|gb|CF011668.1|CF011668
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211342710|gb|FL349130.1|FL349130
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211512108|gb|FL316104.1|FL316104
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCMEST: gi|149013973|gb|EE043481.2|EE043481
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211148579|gb|FL032470.1|FL032470
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: GAAGCACAACAATGTGAACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|93012482|gb|EB638002.1|EB638002
genomic: GAAGCACAACAATGTGA-CTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|76289467|gb|DV029035.1|DV029035
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211399297|gb|FL337150.1|FL337150
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|213191071|gb|FM193242.1|FM193242
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|91873213|gb|EB403170.1|EB403170
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|50327068|gb|CO522194.1|CO522194
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|149107027|gb|EE188922.2|EE188922
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|148950071|gb|EC895603.2|EC895603
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|71757445|gb|DR955382.1|DR955382
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|50325873|gb|CO520999.1|CO520999
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|149112693|gb|EE295526.2|EE295526
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|78111026|gb|DV529423.1|DV529423
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|32907264|gb|CF012077.1|CF012077
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|78109070|gb|DV527487.1|DV527487
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211148582|gb|FL032473.1|FL032473
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|60341814|gb|DN208787.1|DN208787
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|9255285|gb|BE345753.1|BE345753
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|15590470|gb|BI675086.1|BI675086
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211033926|gb|FL358169.1|FL358169
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|9255417|gb|BE345885.1|BE345885
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTEST: gi|101390351|gb|EB817110.1|EB817110
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCT
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAEST: gi|211222771|gb|FL342810.1|FL342810
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
EST: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAAT GTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
genomic: TGAAGCACAACAATGTGACTGTGGATGTGAAAGCAACTTCAGAATCAAATgtaagtggaa ... ttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCA
cgtaacaattgcactgttttcttgtaaaataaaccatagttttgtttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAATTTTATGTGTTCCTTTCCCGTACCAGAAATCTGCAAAG
ccgtaac putative branch site (score: 831)
ttttgtttttcacc putative PPT
ttttcttgtaaaataa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagtggaattatctgttcccgtaacaattgcactgttttcttgtaaaataaaccatagttttgtttttcaccagGTGATAACTACAATCACAGTTCATGAGCTGGGCACACCAGGCTTGAAGGCAATTTTATGTGTTCCTTTCCCGTACCAGAAATCTGCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG