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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...acagctcttagattctgtgtcactagcttgtctttctgagcttactacatggtttgcttctgtcctttgactgatatgctaactcctgttttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA

Basic information

species Zea mays
transcript GRMZM2G110983_T04
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 3
acagctcttagattctgtgtcactagcttgtctttctgagcttactacatggtttgcttctgtcctttgac----tgatatgctaactcctgttttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
      |||    | | | |    |  ||||  || |  |  |     || ||   ||| |     || ||    | | ||  |   | ||     ||   |||||||||| |||||||| || ||||||| |||||| ||||| ||||| ||||| || ||||||||||||||| ||||||| ||||||||||
----tcctttttgtatttattggcattttgttcttgtacgtgtcaccaattgtactcttttacatgttaacactgtcaaattatgtttacttcgccatcgccagGTACGTTCAAGCTGACACTTCAGTTTACTGAAGATTATCCTAACAAGCCACCTACAGTGCGATTTGTTTCTCGGATGTTTCATCCTAACA

upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA08G40860.1 (Glycine max), 3'ss of exon 3
acagctcttagattctgtgtcactagcttgtctttctgagctta-ctacatggtttgcttctgtcctttgactgatatgctaactcctgttttattct--cagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
| || | | |  |     ||  |  ||| || |   ||||| ||  ||||   ||| ||    | | | || |  |||  | |||  | |  | ||||  |||||||||||||| |||| || |||||||  || || ||||| || |||||||| |||||||| ||||||||| | ||||| ||||||||||
aaaggtttaaattgacccgtgccatgctagtttaattgagcctagttacagaattttcta--attcatggatttttata-tgactggtatccttttctttcagGTACGTTTAAGTTGACACTTCAGTTTACAGAGGATTATCCTAATAAACCACCTACTGTGCGCTTTGTTTCTCGAATGTTTCATCCTAACA

upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA18G16160.1 (Glycine max), 3'ss of exon 4
acagctcttagattc-tgtgtcactagcttgtctttctgagcttac-tacatggtttgcttctgtcctttgactgatatgctaactcctgttttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
  |    ||| ||||    ||     | |  | |   || || ||  ||||  |||| ||  | |        | |||||   | |    || | || ||||||||||||||| |||| || |||||||  || || ||||| || |||||||| |||||||| ||||||||| | ||||| ||||||||||
--aaggtttaaattcacccgtttgatggtaatttagttgtgcctaggtacagtgttttctaatttatgaatttttatatgaacaatatccttgtcttttcagGTACGTTTAAGTTGACACTTCAGTTTACAGAGGATTATCCTAATAAACCACCTACTGTGCGTTTTGTTTCTCGAATGTTTCATCCTAACA

upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA18G16160.3 (Glycine max), 3'ss of exon 3
acagctcttagattctgtgtcactagcttgtctttctgagcttac-tacatggtttgcttctgtcctttgactgatatgctaactcctgttttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA-
  || | | |  |     ||     | |  | |   || || ||  ||||  |||| ||  | |        | |||||   | |    || | || ||||||||||||||| |||| || |||||||  || || ||||| || |||||||| |||||||| ||||||||| | ||||| |||||||||| 
--aggtttaaattcacccgtttgatggtaatttagttgtgcctaggtacagtgttttctaatttatgaatttttatatgaacaatatccttgtcttttcaggTACGTTTAAGTTGACACTTCAGTTTACAGAGGATTATCCTAATAAACCACCTACTGTGCGTTTTGTTTCTCGAATGTTTCATCCTAACAG

upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA04G34170.2 (Glycine max), 3'ss of exon 3
------acagctcttagattctg-tgtcactagcttgtctttctga---gcttacta-----catggtttgcttctgtcctttgactgatatgctaac---tcctgtttta---ttctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
        |  ||||       | | | |||||       || |||   | ||   |     || | | |  |||  || | ||  | | ||         || | ||||    |  ||||| ||||| ||| ||||||||||||||| ||| || |||||||| ||||||||||||||||||||||| ||| | ||||| ||||| || |
gtgagtggatttctttaccgaagatcttactagaaaacaattttgaaatgtttgtcaagtgtcaggttctttttccatcttgtgtgttacataactgtgtgtcatattttgagttattcagGCACGTTCAAGTTGACTCTCCAGTTTACTGAGGATTATCCAAATAAACCACCAACTGTGCGATTTGTGTCTCGCATGTTTCATCCAAATA

upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA05G01270.1 (Glycine max), 3'ss of exon 3
acagctcttagattctgtgtcactagcttgtctttctgagcttacta------catggtttgcttctgtcctttg--actgatatgctaactcctgttttattctc-agGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
        | ||| ||   |    || |  ||||| ||    ||||       |||  |||   ||||  | ||   ||    |||   ||   | ||   || || ||| ||||||||| |||||||||| |||| ||| || ||||||||||| ||||||||||| |||||||| ||| | ||||| ||||| ||||
--------tggatgct-catagtcagataatctttatgtatgtacttgggagtcatattttttctctgaacattatcaccataatgtctacatattttgagttatccagGCACGTTTAAGTTGACTCTCCAATTTACTGAGGATTATCCAAACAAGCCACCAACTGTACGATTTGTCTCTCGAATGTTTCATCCAAACA

upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA17G10640.1 (Glycine max), 3'ss of exon 3
acagctcttagattctgtgtcactagcttgtctttctgagcttactacatggtttgcttctgtcctttgac--tgatatgctaactcctg----tttta---ttctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
        | |||  |   |    || |  ||||| ||    | ||  |  ||    || | ||  || ||  |   |   |||   ||     ||||    |   |||| ||||||||| ||| ||| || |||| ||| || ||||||||||| ||||||||||| |||||||| ||| | ||||| || || ||||
--------tggatgat-catagtcagataatctttatgtatatgcttgagagtcatattttttctcttaacattatcacaataatgtctacatattttgagttatccagGCACGTTTAAGTTGATTCTTCAATTTACTGAGGATTATCCAAACAAGCCACCAACTGTACGATTTGTCTCTCGAATGTTTCACCCAAACA

upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: AT2G02760.1 (Arabidopsis thaliana), 3'ss of exon 3
acagctcttagattctgtgtcactagcttgtctttctgagcttactacatggtttgcttctgtcctttgactgatatgctaactcctgttttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
       | |  || |||     ||     |     ||||  |  |      | |  || |||   | | || || | ||   |  | |  | || | |||||| || ||  || | || ||||||   ||||| |||||||| ||||||||||| ||||| ||||||||  ||||||||||||| ||||
------gtaaagttttgttattgtaatcacttaacttgagaattttg-gcaatct-tttatgtatctggtcttatgt-ctcttttgtatggtcttgttagGTACTTTCAAATTGTCACTGCAGTTTTCGGAAGATTATCCAAATAAACCACCAACAGTGCGGTTTGTTTCACGGATGTTCCATCCAAACA

upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: Vv01s0026g01770.t01 (Vitis vinifera), 3'ss of exon 4
-acagctcttagattctgtgtcactagcttgtctttctgagcttactacatggtttgcttctgtcctttgactgata-tgctaactcctgttttattc--tcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
 |||  | ||   ||   |||   |   | ||  || ||||   |||  ||| ||   |  ||   | |   | ||  |||||    ||| || | ||  ||||||||||||||  |||| || |||||||  || || ||||| || || ||||||||||| || ||||||||||| ||||||||||| || |
tacaattgttttgtttgatgtattt--ttcgtggttatgagggcact-tatgatt-attgttggtgtgtatttaatgctgctatgctctgattgaatccttcagGTACGTTTAAATTGACGCTTCAGTTTACAGAGGATTATCCGAATAAGCCACCAACTGTACGCTTTGTTTCTAGAATGTTCCATCCAAATA

upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: Vv17s0000g05820.t01 (Vitis vinifera), 3'ss of exon 3
-acagctcttagattc-tgtgtcactagcttgtctttctgagcttactacatggtttgcttctgtcctttgactgatatgctaactcctgttttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
   | ||  ||  ||| | | | |||            ||           | ||| | |||  | |    |   |||     |  | | |    |  | ||||||||||||  |||| || ||||||   || || |||||||||||||||||||| ||||||||||||||  | ||||||||||| || |
ttaatcttctattttcctttataactgttagaaaggcatggaacattcttttagttcgattccattca--aatctataaagatatccttttgagttctttagGTACGTTTAAATTGACACTTCAGTTTTCGGAGGAGTATCCAAACAAACCACCAACAGTGCGATTTGTTTCCCGTATGTTCCATCCAAATA

upper sequence: GRMZM2G110983_T04 (Zea mays), 3'ss of exon 3
lower sequence: Vv14s0108g00140.t01 (Vitis vinifera), 3'ss of exon 3
acagctcttagattctgtgtcactagct---tgtctttctg--agcttactaca-tggtttgcttctgtcctttgactgatatgctaactcctgttttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
     |  |  |||   | | | ||| |    | | | |||  || ||    ||   ||||   | | |  |||   | ||||   ||    |||| |  |  ||||||||||||||||||| || ||||| |  || || |||||||| || || ||||||||  ||||||||||| | ||||||||||| || |
--tatttatttatttattattattagatatacgacatactgccagtttgtatcagctgtttatatatatatttt--tttatatataaaaaaatgttct--ttccagGTACGTTTAAGCTGACACTTCAGTTCACAGAGGAGTATCCAAATAAGCCCCCAACTGTTAGATTTGTTTCTCGAATGTTCCATCCAAATA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211538845|gb|FL377085.1|FL377085
EST:     ACCTGATGATACCCCGGGGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCA
genomic: ACCTGATGATACCCCGTGGG-ATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCA
EST: gi|60339404|gb|DN206377.1|DN206377
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|6095572|gb|AW120239.1|AW120239
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|31911024|gb|CD651718.1|CD651718
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|93015817|gb|EB641337.1|EB641337
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|78091072|gb|DV519446.1|DV519446
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|7009367|gb|AW455632.1|AW455632
EST:     ACCTGATGATACCCCGNGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGNTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211493296|gb|FL381916.1|FL381916
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAACGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCA
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAA-GCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCA
EST: gi|148987451|gb|EE031302.2|EE031302
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211210236|gb|FL419166.1|FL419166
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAANCAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211276877|gb|FL384344.1|FL384344
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211139481|gb|FL389561.1|FL389561
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|19057489|gb|BM736156.1|BM736156
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|71437400|gb|DR818450.1|DR818450
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211141638|gb|FL394939.1|FL394939
EST:     ACCTGATGATACCCCGT-GGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211257013|gb|FL409686.1|FL409686
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211431063|gb|FL372133.1|FL372133
EST:     ACCTGATGATACCCCGTGG-ATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211279302|gb|FL424075.1|FL424075
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|28984451|gb|BQ539052.2|BQ539052
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211264690|gb|FL426676.1|FL426676
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211212803|gb|FL419182.1|FL419182
EST:     ACCTGATGATACCCCGT-GGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211389989|gb|FL390664.1|FL390664
EST:     ACCTGATGATACCCCGT-GGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|19057669|gb|BM736336.1|BM736336
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211242983|gb|FL396961.1|FL396961
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|76925973|gb|DV170670.1|DV170670
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|148987452|gb|EE031303.2|EE031303
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|149089433|gb|EE178674.2|EE178674
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|148995969|gb|EE035217.2|EE035217
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211328071|gb|FL404908.1|FL404908
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|40337585|gb|CK371655.1|CK371655
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTATTGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211543063|gb|FL424380.1|FL424380
EST:     ACCTGATGATACCCCGTGG-ATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|71758604|gb|DR956541.1|DR956541
EST:     ACCTGATGATACCCCGTGGGAGGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211325990|gb|FL407944.1|FL407944
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|31998321|gb|CD662030.1|CD662030
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|60349464|gb|DN216437.1|DN216437
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|94476158|gb|EB705116.1|EB705116
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211264298|gb|FL408795.1|FL408795
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|71764621|gb|DR962558.1|DR962558
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211328075|gb|FL404912.1|FL404912
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211527022|gb|FL385885.1|FL385885
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|37390719|gb|CF632593.1|CF632593
EST:     CCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: CCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|71432043|gb|DR813093.1|DR813093
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211397664|gb|FL378753.1|FL378753
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211130127|gb|FL391841.1|FL391841
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACRAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|37400900|gb|CF637810.1|CF637810
EST:     ACCTGATGATACCTCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|9953022|gb|BE639605.1|BE639605
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|148945585|gb|EC890839.2|EC890839
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211259013|gb|FL391917.1|FL391917
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211279410|gb|FL429245.1|FL429245
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211339494|gb|FL422740.1|FL422740
EST:     ACCTGATGATACCCCGTGG-ATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|31355622|gb|CD439979.1|CD439979
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211335044|gb|FL425889.1|FL425889
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|60353222|gb|DN220195.1|DN220195
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|32855553|gb|CD995234.1|CD995234
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|78090216|gb|DV518590.1|DV518590
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211016754|gb|FL384168.1|FL384168
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211163060|gb|FL403920.1|FL403920
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211406021|gb|FL417176.1|FL417176
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|148955727|gb|EC901419.2|EC901419
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|19436828|gb|BM953238.1|BM953238
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|94476159|gb|EB705117.1|EB705117
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211269005|gb|FL402739.1|FL402739
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211330135|gb|FL399652.1|FL399652
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|148983344|gb|EE029324.2|EE029324
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|32864121|gb|CF003803.1|CF003803
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211363561|gb|FL402329.1|FL402329
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|40337266|gb|CK371336.1|CK371336
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211456944|gb|FL421188.1|FL421188
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|148983345|gb|EE029325.2|EE029325
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|18180299|gb|BM381509.1|BM381509
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211161329|gb|FL392794.1|FL392794
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211521047|gb|FL387959.1|FL387959
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211496359|gb|FL389432.1|FL389432
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211397809|gb|FL388882.1|FL388882
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211407980|gb|FL375631.1|FL375631
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|87156604|gb|DY401393.1|DY401393
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|9951993|gb|BE638576.1|BE638576
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211147505|gb|FL408667.1|FL408667
EST:     ACCTGATGATACCCCGT-GGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211443180|gb|FL376062.1|FL376062
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAG
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAG
EST: gi|211155043|gb|FL401267.1|FL401267
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211447854|gb|FL393930.1|FL393930
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|37400480|gb|CF637593.1|CF637593
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTATTGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|32909034|gb|CF013846.1|CF013846
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211202728|gb|FL429663.1|FL429663
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211294904|gb|FL412757.1|FL412757
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|19058805|gb|BM737472.1|BM737472
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|16921407|gb|BM075135.1|BM075135
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|32919913|gb|CF024725.1|CF024725
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|19436829|gb|BM953239.1|BM953239
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|6031466|gb|AW076368.1|AW076368
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|93015818|gb|EB641338.1|EB641338
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|149108751|gb|EE292946.2|EE292946
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211048540|gb|FL405133.1|FL405133
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|32910066|gb|CF014878.1|CF014878
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211303492|gb|FL414928.1|FL414928
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|78091073|gb|DV519447.1|DV519447
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|60352748|gb|DN219721.1|DN219721
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|37397940|gb|CF636278.1|CF636278
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|28930915|gb|CB334276.1|CB334276
EST:     ACCTGATGATACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211116865|gb|FL397786.1|FL397786
EST:     ACCTGATGAMTACCCCGTGGGATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGA-TACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
EST: gi|211051708|gb|FL411708.1|FL411708
EST:     ACCTGATGATACCCCGTGG-ATGGAG                         GTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC
genomic: ACCTGATGATACCCCGTGGGATGGAGgttagtgaag ... ttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCAC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tacatggtttgcttctgtcctttgactgatatgctaactcctgttttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA
                               tgctaac  putative branch site (score: 1)
                                     ctcctgttttattctc  CT-rich tract
                                         tgttttatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
acagctcttagattctgtgtcactagcttgtctttctgagcttactacatggtttgcttctgtcctttgactgatatgctaactcctgttttattctcagGTACGTTTAAGCTGACTCTCCAGTTTAATGAAGAATATCCAAACAAACCACCAACTGTGCGATTTGTTTCTAGGATGTTCCATCCTAACA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGATG