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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gcgtgcctgttcgtgtgctatgagcatgaccccgagcatatggtatttatttctgagaaattagtttctgttattgatttgttgtaagtcctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAGATCATCAGGGAACCAATAGTCAGTAAATATGGTTCTGATGATGGGCTTC

Basic information

species Zea mays
transcript GRMZM2G107639_T02
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G107639_T01 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os01g08270.1 (Oryza sativa), 3'ss of exon 3
----gcgtgcctgttcgtgtgctatgagcatgaccccgagcatatggtatttatttctgagaaattagtttctgt-tattgatttgttgtaagtcctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAGATCATCAGGGAACCAATAGTCAGTAAATATGGTTCTGATGATGGGCTTC
    | |||  || | |  | |||| |     | |  || ||| || |||||| |     ||||||| || || | | || |  |  ||||| || || ||||||||||||||||| ||||| ||||| ||| |||||||| |||||||  || | ||  |  ||||||||  | ||||||||||||| ||||||||||| ||||
agtggtgtgtgtgctggcctcctattactgccaaca-gaacatgtgatatttact----ggaaattatttgctttcttttaaactaatgtaaatcttggatgcagGGAGTTGTTTATTGGCAGCCTCCTGAGGCAGCTATGAATAAGATTAAAGAAATTGTATGGGAACCATCAATCAGTAAATATGGCTCTGATGATGGTCTTC
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211470276|gb|FL336876.1|FL336876
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211537775|gb|FL336421.1|FL336421
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211528508|gb|FL328866.1|FL328866
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGGATAAGATCGAAAA
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGG-ATAAGATCGAAAA
EST: gi|148932368|gb|EC876010.2|EC876010
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211529039|gb|FL347042.1|FL347042
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211307789|gb|FL085770.1|FL085770
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211325052|gb|FL357886.1|FL357886
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211519775|gb|FL337741.1|FL337741
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAWAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211329406|gb|FL358391.1|FL358391
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211526539|gb|FL366365.1|FL366365
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|91877308|gb|EB407265.1|EB407265
EST:     ATACAAGAACTGCTCCCAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCC
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCC
EST: gi|67030337|gb|CO459086.1|CO459086
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211061387|gb|FL333865.1|FL333865
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211262318|gb|FL317280.1|FL317280
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211237919|gb|FL362192.1|FL362192
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211525076|gb|FL312407.1|FL312407
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|148990980|gb|EE032414.2|EE032414
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|149037081|gb|EE155270.2|EE155270
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211023084|gb|FL313921.1|FL313921
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211213774|gb|FL353738.1|FL353738
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|148931036|gb|EC873618.2|EC873618
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211305634|gb|FL309433.1|FL309433
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211448663|gb|FL323020.1|FL323020
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211362582|gb|FL351447.1|FL351447
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211136252|gb|FL346220.1|FL346220
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211320586|gb|FL352820.1|FL352820
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|76286951|gb|DV026519.1|DV026519
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211162581|gb|FL363060.1|FL363060
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211126683|gb|FL312966.1|FL312966
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|19351033|gb|BM895565.1|BM895565
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGACGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211010784|gb|FL361163.1|FL361163
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211111425|gb|FL330322.1|FL330322
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211135049|gb|FL315824.1|FL315824
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|148963140|gb|EE014107.2|EE014107
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211260539|gb|FL346343.1|FL346343
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|148950038|gb|EC895570.2|EC895570
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|149112179|gb|EE295100.2|EE295100
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|149084340|gb|EE173781.2|EE173781
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211467483|gb|FL327943.1|FL327943
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|148947797|gb|EC893285.2|EC893285
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211320872|gb|FL365292.1|FL365292
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211171826|gb|FL323734.1|FL323734
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTC
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTC
EST: gi|211391856|gb|FL357117.1|FL357117
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211026505|gb|FL356245.1|FL356245
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|50325408|gb|CO520534.1|CO520534
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
EST: gi|211050425|gb|FL364299.1|FL364299
EST:     ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAG                         GGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG
genomic: ATACAAGAACTGCTCCGAGGGGCCAAGGATGTGATGTCGCTTGCGCAGgtatactctc ... ctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttatttctgagaaattagtttctgttattgatttgttgtaagtcctgaatgcagGGAGTTGTTTACTGGCAACCTCCCGAGTCAGCTATGGATAAGATCGAAAAGATCATCAGGGAACCAATAGTCAGTAAATATGGTTCTGATGATGGGCTTC
                          tattgat  putative branch site (score: 3)
            aaattagttt  TA-rich tract