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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtattcttcaaaatggcactgagctactgattgcttgtctgaggtgcacaacaattgctaatgagccaatgatgtatgacatctaccaccaattcatttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCAGCTGGAGGACCAAATAGAGATATCTCTGAAGCATATCAGCTCAAGAAAG

Basic information

species Zea mays
transcript GRMZM2G099522_T01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G099522_T02 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os03g11614.1 (Oryza sativa), 3'ss of exon 3
gtattcttcaaaatggcactgagctactgattgc------ttgtct------gaggtgcacaacaattgctaatgagccaatgatgtatgac--atctaccaccaattcatttc-tgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCAGCTGGAGGACCAAATAGAGATATCTCTGAAGCATATCAGCTCAAGAAAG
||| |||||| |   | |    || | | ||| |      || |||      ||| |||       || || | |  |  |   | ||||||  |    | | || ||||   | ||||||||||||||||| |||||| |||| ||||| |||||||||||||| |||||||| ||| |||| |||||  |||| || || || ||||| |||||||||
gtagtcttcagagatgaatgtggccaatcatttcagcttcttatctactacagagttgctatgttcttcctgagggacagagtttctatgacttactagcaagcacttcacaccatgcagAAATATTCTTGGTGAGGATTTGGGCCCACTAAGCATGAAGGAGCTGGAGCAGCTTGAGAACCAGATAGAAGTATCCCTCAAACAAATCAGGTCAAGAAAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211425701|gb|FL364979.1|FL364979
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|91875363|gb|EB405320.1|EB405320
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|32857754|gb|CD997435.1|CD997435
EST:     GATTATCTCAAGGTGAGGACAAGGGTCGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGCGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211251102|gb|FL353279.1|FL353279
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211019213|gb|FL365161.1|FL365161
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGA
EST: gi|211507728|gb|FL332392.1|FL332392
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGC
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGC
EST: gi|211522292|gb|FL320500.1|FL320500
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGG
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGG
EST: gi|211193049|gb|FL326929.1|FL326929
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|32846169|gb|CD985850.1|CD985850
EST:     GATTATCTCAAGTTGAGGACAAGGGTCGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGCGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211157483|gb|FL345406.1|FL345406
EST:     AAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: AAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|31360882|gb|CD445239.1|CD445239
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211186311|gb|FL345877.1|FL345877
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTT
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTT
EST: gi|211033671|gb|FL344496.1|FL344496
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211050317|gb|FL359421.1|FL359421
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211093425|gb|FL320646.1|FL320646
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211362510|gb|FL346909.1|FL346909
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCAC
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCAC
EST: gi|211137848|gb|FL308432.1|FL308432
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211255185|gb|FL327779.1|FL327779
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211293139|gb|FL323373.1|FL323373
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211156084|gb|FL357770.1|FL357770
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211437459|gb|FL316489.1|FL316489
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTGCTCCAAACTACACAAAG                         AAATATTCTTSGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211519811|gb|FL338570.1|FL338570
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211309835|gb|FL318646.1|FL318646
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCCGAGC
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTC-GAGC
EST: gi|211514414|gb|FL314334.1|FL314334
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGGTCCACTTAGCATGAAGGAGCTCGAGC
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGG-TCCACTTAGCATGAAGGAGCTCGAGC
EST: gi|7145381|gb|AW506862.1|AW506862
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|32848261|gb|CD987942.1|CD987942
EST:     GATTATCTCAAGTTGAGGACAAGGGTCGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGCGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211495608|gb|FL359816.1|FL359816
EST:     ATTATTCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATC
genomic: ATTAT-CTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATC
EST: gi|211505719|gb|FL354388.1|FL354388
EST:     ATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCG
genomic: ATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAA-CTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCG
EST: gi|211260958|gb|FL364885.1|FL364885
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|32836291|gb|CD975969.1|CD975969
EST:     GATTATCTCAAGTTGAGGACAAGGGTCGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGCGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211393335|gb|FL307381.1|FL307381
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211004723|gb|FL346555.1|FL346555
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211172109|gb|FL336630.1|FL336630
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTA
EST: gi|211004724|gb|FL346556.1|FL346556
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211224663|gb|FL333921.1|FL333921
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|32846341|gb|CD986022.1|CD986022
EST:     GATTATCTCAAGTTGAGGACAAGGGTCGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGCGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211380766|gb|FL330020.1|FL330020
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211534881|gb|FL340869.1|FL340869
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|32848303|gb|CD987984.1|CD987984
EST:     GATTATCTCAAGTTGAGGACAAGGGTCGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGCGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|89761505|gb|DY689494.1|DY689494
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
EST: gi|211208341|gb|FL339680.1|FL339680
EST:     GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAG                         AAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA
genomic: GATTATCTCAAGTTGAGGACAAGGGTTGAATTCCTCCAAACTACACAAAGgtattcttca ... atttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

acaattgctaatgagccaatgatgtatgacatctaccaccaattcatttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCAGCTGGAGGACCAAATAGAGATATCTCTGAAGCATATCAGCTCAAGAAAG
     tgctaat  putative branch site (score: 2)
                                          ttcatttct  putative PPT
                                        aattcattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtattcttcaaaatggcactgagctactgattgcttgtctgaggtgcacaacaattgctaatgagccaatgatgtatgacatctaccaccaattcatttctgcagAAATATTCTTGGGGAGGATCTGGGTCCACTTAGCATGAAGGAGCTCGAGCAGCTGGAGGACCAAATAGAGATATCTCTGAAGCATATCAGCTCAAGAAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA