Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcggtgccctttctctctttctctctctctctctttcccagatctgccacccacccagaccaaggatctttacccctctctgtctctctctctgttgctcgtccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGCATCAACAAGGCCGGCGTGGGCCACAAGATCGACTTCCGCGAGGGCCCCG

Basic information

species Zea mays
transcript GRMZM2G099363_T02
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G099363_T03 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os06g06980.3 (Oryza sativa), 3'ss of exon 2
gtcggtgccctttctctctttctctctctctctctttcccagatctgccacccacccagaccaaggatctttacccctctctgtctctctctctgttgctcgtccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGCATCAACAAGGCCGGCGTGGGCCACAAGATCGACTTCCGCGAGGGCCCCG
||| |   |    | |   | | |  ||||| ||  || |||||||| ||             |    |   | |  |    |||  || ||||| |            |||||||||||| |||||||||||||| |||||||||||||| || || || |  ||| | ||||| || ||||  ||||||||||||||||| ||||| ||||
gtcagcaaca---cgcaaatcccccatctct-tccatcgcagatctggcaa-----------gaaatccccaatcgattgacgtccatccctctgctaactaat-----gcagATCTTGGCGATGGACATCAACCGGGAGAACTACGAGCTGGGGCTCCCGTCGATCGAGAAGGCGGGAGTGGCGCACAAGATCGACTTCCGGGAGGGACCCG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|149101272|gb|EE187384.2|EE187384
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|148972013|gb|EE022838.2|EE022838
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGACCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|78123950|gb|DV542334.1|DV542334
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|18963317|gb|BM660366.1|BM660366
EST:     GCTACTACAGCTCCTCAGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: GCTACT-C-GCTCCTC-GCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|50336771|gb|CO531897.1|CO531897
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|91051409|gb|EB161827.1|EB161827
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|71443172|gb|DR824222.1|DR824222
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|67031902|gb|CO460651.1|CO460651
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|91876481|gb|EB406438.1|EB406438
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|120479778|gb|EH210632.1|EH210632
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|211456349|gb|FL164074.1|FL164074
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|91876447|gb|EB406404.1|EB406404
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|211456348|gb|FL164073.1|FL164073
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|71765961|gb|DR963898.1|DR963898
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|67019504|gb|CO448253.1|CO448253
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|148998166|gb|EE035959.2|EE035959
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|5510830|gb|AI857214.1|AI857214
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|74238429|gb|DT646343.1|DT646343
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|148985087|gb|EE029621.2|EE029621
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|78082021|gb|DV510433.1|DV510433
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGACCTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|78123859|gb|DV542243.1|DV542243
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|67017580|gb|CO446329.1|CO446329
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|76915702|gb|DV166083.1|DV166083
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|149015442|gb|EE045300.2|EE045300
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|148999943|gb|EE037004.2|EE037004
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|149014739|gb|EE044420.2|EE044420
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|149070197|gb|EE158600.2|EE158600
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|71761423|gb|DR959360.1|DR959360
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|211456350|gb|FL164075.1|FL164075
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|71445182|gb|DR826232.1|DR826232
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|149077072|gb|EE165728.2|EE165728
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|86474833|gb|DY241203.1|DY241203
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|16916553|gb|BM072891.1|BM072891
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|74238430|gb|DT646344.1|DT646344
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|78091016|gb|DV519390.1|DV519390
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|93012213|gb|EB637733.1|EB637733
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|211456343|gb|FL164068.1|FL164068
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACCATCA-CCGCGAGAACTACGAGCTAGGCCTTCCCTG
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGAC-ATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTG
EST: gi|93012147|gb|EB637667.1|EB637667
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|76012700|gb|DT939870.1|DT939870
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|91874063|gb|EB404020.1|EB404020
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|50337682|gb|CO532808.1|CO532808
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|71438266|gb|DR819316.1|DR819316
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|94479696|gb|EB708654.1|EB708654
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCT
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCC-ATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCT
EST: gi|78121952|gb|DV540336.1|DV540336
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGGCATGGACATCAAC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAAC
EST: gi|50334621|gb|CO529747.1|CO529747
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|148935114|gb|EC879154.2|EC879154
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|33466804|gb|CF243853.1|CF243853
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|91879069|gb|EB409026.1|EB409026
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|50337681|gb|CO532807.1|CO532807
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|89759581|gb|DY688363.1|DY688363
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|149050399|gb|EE155646.2|EE155646
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|37379818|gb|CF626673.1|CF626673
EST:     CCGGATACTCGTTCCTGGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|78089028|gb|DV517421.1|DV517421
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|211456344|gb|FL164069.1|FL164069
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|211456345|gb|FL164070.1|FL164070
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAAGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGGCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|149014740|gb|EE044421.2|EE044421
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|50338479|gb|CO533605.1|CO533605
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|50328057|gb|CO523183.1|CO523183
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|86474834|gb|DY241204.1|DY241204
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|18963587|gb|BM660518.1|BM660518
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|14244780|gb|BG842718.2|BG842718
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|211456347|gb|FL164072.1|FL164072
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|19351241|gb|BM895773.1|BM895773
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|211091281|gb|FL220529.1|FL220529
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
EST: gi|71446731|gb|DR827781.1|DR827781
EST:     CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACG                         ATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC
genomic: CCGGCTACTCGCTCCTCGCCACCGCGCTCGCACTCCCGGAGGACGGCACGgtcggtgccc ... ccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaccaaggatctttacccctctctgtctctctctctgttgctcgtccccccgcagATCTTGGCCATGGACATCAACCGCGAGAACTACGAGCTAGGCCTTCCCTGCATCAACAAGGCCGGCGTGGGCCACAAGATCGACTTCCGCGAGGGCCCCG
         tctttacccctctctg  CT-rich tract
        atcttta  TA-rich tract