Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tctcgtgtgtgtacaagccactgatgcgaaaaaactgttggtgtggaagtttatgatacttgaagctgtattttagacacatttttcttcttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG

Basic information

species Zea mays
transcript GRMZM2G094712_T02
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G094712_T02 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os01g55540.2 (Oryza sativa), 3'ss of exon 3
tctcgtgtgtgtacaagccactgatgcgaaaaaactgttggtgtgg-aagtttatga---tacttgaagctgtattttagacacatttttcttcttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG
     || || |||| |      |  | |   |    ||  |   | ||  ||||||   || |   || |||||||||       || | | ||| |  ||||||||||||| ||||||||  | || ||||| || ||||| || |||||||||||||| ||||||||||| ||||| ||||||||
---gatgggtttacaggaagaaaaaaccattgactattttttacagcaaacttatgatgatattcccagttgtattttacctgtgattatttgctt-tgactagGTCACGTGTTAAGGAGTATTTGCCGATCACTGGACTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG

upper sequence: GRMZM2G094712_T02 (Zea mays), 3'ss of exon 3
lower sequence: Vv04s0008g03770.t01 (Vitis vinifera), 3'ss of exon 3
tctcgtgtgtgtacaagccactgatgcgaaaaaactgttggtgtggaagtttatgatacttgaagctgtattttagacacatttttcttcttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG
    ||| |  | | |  || |         |   |     ||||||||        | ||| ||      || ||   || ||| | |   |||   ||||| || ||||| || || || || ||    || ||||| |||||||||||  |||| |||||||| || ||||||||||||||
----gtgaggattcta-tcattttcattgtgatggtaactttgtggaag--------aattggagta----ttgagcttcaatttccatggcatt--cagGTCCCGGGTCAAAGAATATCTTCCTATTGTTGGGCTGGCAGAATTCAATAAATTGAGTGCTAAGCTCATGTTTGGCGCTGACAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32798377|gb|CD950613.1|CD950613
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211351968|gb|FL217074.1|FL217074
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|51592836|gb|CV071982.1|CV071982
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|15323595|gb|BI478852.1|BI478852
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|32798706|gb|CD950942.1|CD950942
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|47961783|gb|CN844492.1|CN844492
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211211706|gb|FL374152.1|FL374152
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAGTCGCCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|31357714|gb|CD442071.1|CD442071
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|51592763|gb|CV071909.1|CV071909
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|6021419|gb|AW066347.1|AW066347
EST:     CTA-TGCTGAACG-GGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|18053152|gb|BM318810.1|BM318810
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211014760|gb|FL416055.1|FL416055
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|32808331|gb|CD960565.1|CD960565
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAACTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|18385028|gb|BM418227.1|BM418227
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211443956|gb|FL410276.1|FL410276
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|18385008|gb|BM418207.1|BM418207
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCA-TCACCGGTCTGGCTGAATTCA-TAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211099665|gb|FL378492.1|FL378492
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|51593002|gb|CV072148.1|CV072148
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|62550538|gb|DN830958.1|DN830958
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCCACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|58029674|gb|CX725101.1|CX725101
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|20803254|gb|BQ294304.1|BQ294304
EST:     CTAGTGCTGAACGTGTTCTGGCGCGCTTTGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|33942552|gb|CF349152.1|CF349152
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|108953678|gb|EC364837.1|EC364837
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|58029769|gb|CX725196.1|CX725196
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|44681683|gb|CK786731.1|CK786731
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|47962228|gb|CN844937.1|CN844937
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|67024299|gb|CO453048.1|CO453048
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211144698|gb|FL413095.1|FL413095
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGCTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|47961407|gb|CN844116.1|CN844116
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|108954266|gb|EC365083.1|EC365083
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|94476203|gb|EB705161.1|EB705161
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|32803624|gb|CD955860.1|CD955860
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|15188202|gb|BI417179.1|BI417179
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|31353308|gb|CD437665.1|CD437665
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|149014131|gb|EE043672.2|EE043672
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|108953108|gb|EC364589.1|EC364589
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|62550494|gb|DN830914.1|DN830914
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|6020876|gb|AW065804.1|AW065804
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211323634|gb|FL399609.1|FL399609
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|47961406|gb|CN844115.1|CN844115
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|109637234|gb|EC590779.1|EC590779
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|31356983|gb|CD441340.1|CD441340
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|62550589|gb|DN831009.1|DN831009
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAACCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211041751|gb|FL371252.1|FL371252
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211199749|gb|FL411771.1|FL411771
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211432198|gb|FL427261.1|FL427261
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211493670|gb|FL398960.1|FL398960
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|33100620|gb|CF060580.1|CF060580
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCT
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCT
EST: gi|26456907|gb|CA828490.1|CA828490
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|45213782|gb|CK850009.1|CK850009
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|20507973|gb|BQ279845.1|BQ279845
EST:     TAGTGCTGAACGTGGTCAGGCGCGCCGTAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: TAGTGCTGAACGTGGTCAGGCGCGCCG-AGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|47961457|gb|CN844166.1|CN844166
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|38502508|gb|CF972368.1|CF972368
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211504654|gb|FL412020.1|FL412020
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211449902|gb|FL391246.1|FL391246
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|18383833|gb|BM417033.1|BM417033
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|44682191|gb|CK787239.1|CK787239
EST:     CTAGTGCTGACCGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|15323594|gb|BI478851.1|BI478851
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211535952|gb|FL381085.1|FL381085
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|148986993|gb|EE030811.2|EE030811
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|31250263|gb|CD219287.1|CD219287
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211296653|gb|FL387902.1|FL387902
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|213184108|gb|FM191702.1|FM191702
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|149108013|gb|EE292368.2|EE292368
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|31361794|gb|CD446151.1|CD446151
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211313595|gb|FL415828.1|FL415828
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|9731418|gb|BE510170.1|BE510170
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|111433992|gb|EE298061.1|EE298061
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|109637672|gb|EC591217.1|EC591217
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|111145728|gb|EE258080.1|EE258080
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATGATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211289848|gb|FL370551.1|FL370551
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|31351488|gb|CD435845.1|CD435845
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|16137336|gb|BI894201.1|BI894201
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211029227|gb|FL368599.1|FL368599
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|148940851|gb|EC885683.2|EC885683
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|61119383|gb|DN560344.1|DN560344
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCT
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCT
EST: gi|31363808|gb|CD448163.1|CD448163
EST:     GGCGCGCTGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: GGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|148941397|gb|EC886314.2|EC886314
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|32798269|gb|CD950505.1|CD950505
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211493669|gb|FL398959.1|FL398959
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|31358307|gb|CD442664.1|CD442664
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211039937|gb|FL415152.1|FL415152
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|31250213|gb|CD219237.1|CD219237
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|9255298|gb|BE345766.1|BE345766
EST:     TTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211130248|gb|FL407379.1|FL407379
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|47961719|gb|CN844428.1|CN844428
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|29130123|gb|CB380827.1|CB380827
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|108823876|gb|EC277884.1|EC277884
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|9255430|gb|BE345898.1|BE345898
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211159439|gb|FL370490.1|FL370490
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|9461770|gb|BE453896.1|BE453896
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|62525922|gb|DN828570.1|DN828570
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|6626482|gb|AW258014.1|AW258014
EST:     GCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: GCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|32798421|gb|CD950657.1|CD950657
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|149065671|gb|EE286793.2|EE286793
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|9794571|gb|BE552879.1|BE552879
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|109637534|gb|EC591079.1|EC591079
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211060007|gb|FL387699.1|FL387699
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|51592747|gb|CV071893.1|CV071893
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211363355|gb|FL393791.1|FL393791
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|60672637|gb|DN475335.1|DN475335
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|40485897|gb|CK394794.1|CK394794
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211266269|gb|FL388730.1|FL388730
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
EST: gi|211245085|gb|FL389172.1|FL389172
EST:     CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCC                         GTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA
genomic: CTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 681

GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1573

GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1157

GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1752

GAAGGGAAGCCCCTAGTGCTGAACGTGGTCAGGCGCGCCGAGCAAATGTTGATCAATAATCCgtaagtgtca ... ttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaagtttatgatacttgaagctgtattttagacacatttttcttcttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG
                                cacatttttcttctta  CT-rich tract
                                   atttttcttcttattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tctcgtgtgtgtacaagccactgatgcgaaaaaactgttggtgtggaagtttatgatacttgaagctgtattttagacacatttttcttcttatttctagGTCACGTGTCAAGGAGTACCTACCAATCACCGGTCTGGCTGAATTCAATAAGCTGAGCGCTAAGCTTATCTTTGGCGCTGACAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - -caagcca
- - - - - - - - - - ctgatgc
- - - - - - - - - - - - - -gaaaaaa
- - - - - - - - - - - - - - - - - -tgttggt
- - - - - - - - - - - - - - - - - - - - - - - - - - -tgatact
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