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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...atggattgagagctaaccgaacaagcccttacctggtttgctatgtttggttgtccgttgtatagtggtagattctgatttcatattttgttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATCAAGCAGTAGATTTTACATCTAGTTTACCAAGAATTGGACACTGCCTTAG

Basic information

species Zea mays
transcript GRMZM2G093574_T01
intron # 3
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32843519|gb|CD983200.1|CD983200
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211382688|gb|FL304273.1|FL304273
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGGAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32843390|gb|CD983071.1|CD983071
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32836709|gb|CD976387.1|CD976387
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211382693|gb|FL304278.1|FL304278
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|17930209|gb|BM267169.1|BM267169
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211380050|gb|FL304259.1|FL304259
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|29946660|gb|CB816261.1|CB816261
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211070260|gb|FL122119.1|FL122119
EST:     ATGATGGTCACTTCACAACATTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGATGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|18649083|gb|BM497902.1|BM497902
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211382695|gb|FL304280.1|FL304280
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32928558|gb|CF033370.1|CF033370
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32843744|gb|CD983425.1|CD983425
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211197342|gb|FL304252.1|FL304252
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|166673503|gb|EG321787.1|EG321787
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTTCGTGCTCAG                         GGCGACGCAGAC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGAC
EST: gi|32842769|gb|CD982450.1|CD982450
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|19436502|gb|BM952912.1|BM952912
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|33103011|gb|CF062971.1|CF062971
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|22490143|gb|BU050066.1|BU050066
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGC---AGAAGAAGGCTGAT
EST: gi|32843315|gb|CD982996.1|CD982996
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32838400|gb|CD978078.1|CD978078
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|30088384|gb|CB886589.1|CB886589
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32841230|gb|CD980911.1|CD980911
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|16925158|gb|BM078226.1|BM078226
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211197333|gb|FL304243.1|FL304243
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32851170|gb|CD990851.1|CD990851
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|37390683|gb|CF632575.1|CF632575
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTTCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGC---AGAAGAAGGCTGAT
EST: gi|32826389|gb|CD966067.1|CD966067
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32823501|gb|CD963223.1|CD963223
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32837820|gb|CD977498.1|CD977498
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211067519|gb|FL122104.1|FL122104
EST:     ATGATGGTCACTTCACAACATTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGATGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|87153808|gb|DY398597.1|DY398597
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211380045|gb|FL304254.1|FL304254
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|18654613|gb|BM499418.1|BM499418
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32823893|gb|CD963615.1|CD963615
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|31909633|gb|CD651016.1|CD651016
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211380051|gb|FL304260.1|FL304260
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32839420|gb|CD979101.1|CD979101
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|30307246|gb|CD001919.1|CD001919
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211197335|gb|FL304245.1|FL304245
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32842930|gb|CD982611.1|CD982611
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32839148|gb|CD978829.1|CD978829
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGTCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|33103153|gb|CF063113.1|CF063113
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGGCAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211382684|gb|FL304269.1|FL304269
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32803906|gb|CD956142.1|CD956142
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211197338|gb|FL304248.1|FL304248
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|28873362|gb|CB329361.1|CB329361
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|29545037|gb|CB605215.1|CB605215
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCT-ATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32838438|gb|CD978116.1|CD978116
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|29543741|gb|CB604121.1|CB604121
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211380058|gb|FL304267.1|FL304267
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211081227|gb|FL122187.1|FL122187
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGTTGTGGCAGAAGAAGAAGGTTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--GCT-GAT
EST: gi|211382689|gb|FL304274.1|FL304274
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|18648950|gb|BM497769.1|BM497769
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|19821951|gb|BQ047975.1|BQ047975
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|20300065|gb|BQ163008.1|BQ163008
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|33096043|gb|CF056037.1|CF056037
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|33102083|gb|CF062043.1|CF062043
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32842964|gb|CD982645.1|CD982645
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|30088305|gb|CB886510.1|CB886510
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGTTGTGGCAGAAGAAGAAGGTTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--GCT-GAT
EST: gi|211197337|gb|FL304247.1|FL304247
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32928157|gb|CF032969.1|CF032969
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32836321|gb|CD975999.1|CD975999
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32837455|gb|CD977133.1|CD977133
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|22491261|gb|BU051184.1|BU051184
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACTTCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGC---AGAAGAAGGCTGAT
EST: gi|211380046|gb|FL304255.1|FL304255
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211385320|gb|FL304282.1|FL304282
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32825697|gb|CD965407.1|CD965407
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211382691|gb|FL304276.1|FL304276
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211380056|gb|FL304265.1|FL304265
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|30031973|gb|CB833824.1|CB833824
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|19350656|gb|BM895188.1|BM895188
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|4226424|gb|AI396531.1|AI396531
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|29577060|gb|CB617172.1|CB617172
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32826356|gb|CD966034.1|CD966034
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|18654614|gb|BM499419.1|BM499419
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|33093804|gb|CF053798.1|CF053798
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|30087479|gb|CB885685.1|CB885685
EST:     ATGATGGTCACTTCACAACGTTTGCTCTTTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|29945625|gb|CB815735.1|CB815735
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32838851|gb|CD978532.1|CD978532
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32826044|gb|CD965722.1|CD965722
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32832997|gb|CD972675.1|CD972675
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32843054|gb|CD982735.1|CD982735
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211197341|gb|FL304251.1|FL304251
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211304059|gb|FL334826.1|FL334826
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGTGACGCAGACAGCTCCTTGGACAGGCTGTGGCAAAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCA---GAAGAAGGCTGAT
EST: gi|113787747|gb|DW905542.1|DW905542
EST:     GTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: GTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|19350584|gb|BM895116.1|BM895116
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32842378|gb|CD982059.1|CD982059
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32826084|gb|CD965762.1|CD965762
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211197334|gb|FL304244.1|FL304244
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32825734|gb|CD965440.1|CD965440
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32826212|gb|CD965890.1|CD965890
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCCGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211194939|gb|FL304239.1|FL304239
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|29947327|gb|CB816597.1|CB816597
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32843046|gb|CD982727.1|CD982727
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32826872|gb|CD966550.1|CD966550
EST:     ATGATGGTCACTTCACAACGGTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211380053|gb|FL304262.1|FL304262
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32793236|gb|CD945472.1|CD945472
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGCTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211380049|gb|FL304258.1|FL304258
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211081217|gb|FL122177.1|FL122177
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGTTGTGGCAGAAGAAGAAGGTTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--GCT-GAT
EST: gi|32836832|gb|CD976510.1|CD976510
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32834178|gb|CD973856.1|CD973856
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|29543416|gb|CB603812.1|CB603812
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|28987355|gb|CB351593.1|CB351593
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32942376|gb|CF047195.1|CF047195
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|19058524|gb|BM737191.1|BM737191
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211194937|gb|FL304237.1|FL304237
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|60395536|gb|DN228406.1|DN228406
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|74035151|gb|DT535641.1|DT535641
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGTTGTGGCAGAAGAAGAAGGTTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--GCT-GAT
EST: gi|19436380|gb|BM952790.1|BM952790
EST:     ATCATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|211385322|gb|FL304284.1|FL304284
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCACACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32831986|gb|CD971664.1|CD971664
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|32825903|gb|CD965581.1|CD965581
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|50333278|gb|CO528404.1|CO528404
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|32826259|gb|CD965937.1|CD965937
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCGGTGGCAGAAGAAGAAGGCTGAT
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAG--G-CTGAT
EST: gi|31909161|gb|CD650780.1|CD650780
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|211382696|gb|FL304281.1|FL304281
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|30088385|gb|CB886590.1|CB886590
EST:     ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: ATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
EST: gi|113648201|gb|DW806607.1|DW806607
EST:     TCTGGGTTTGTCCGTGCTCAG                         GGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC
genomic: TCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2747

CCATGCCTCTGTCCAGATCAACATTGGCCACTTGGATGCGAATGGCCTGTATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATCAAGCAGTAGATTTTACATCTAGTTTACCAAGAATTGGACACTGCCTTAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2285

CCATGCCTCTGTCCAGATCAACATTGGCCACTTGGATGCGAATGGCCTGTATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATCAAGCAGTAGATTTTACATCTAGTTTACCAAGAATTGGACACTGCCTTAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1558

CCATGCCTCTGTCCAGATCAACATTGGCCACTTGGATGCGAATGGCCTGTATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATCAAGCAGTAGATTTTACATCTAGTTTACCAAGAATTGGACACTGCCTTAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1179

CCATGCCTCTGTCCAGATCAACATTGGCCACTTGGATGCGAATGGCCTGTATGATGGTCACTTCACAACGTTTGCTCTCTCTGGGTTTGTCCGTGCTCAGgtgatagttc ... ttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATCAAGCAGTAGATTTTACATCTAGTTTACCAAGAATTGGACACTGCCTTAG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttggttgtccgttgtatagtggtagattctgatttcatattttgttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATCAAGCAGTAGATTTTACATCTAGTTTACCAAGAATTGGACACTGCCTTAG
                           ttctgat  putative branch site (score: 1179)
                                        ttttgtt  putative PPT
                                atttcatattttgtt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
atggattgagagctaaccgaacaagcccttacctggtttgctatgtttggttgtccgttgtatagtggtagattctgatttcatattttgttgtgcatagGGCGACGCAGACAGCTCCTTGGACAGGCTGTGGCAGAAGAAGGCTGATATCAAGCAGTAGATTTTACATCTAGTTTACCAAGAATTGGACACTGCCTTAG

- - - - - - - - - - -caagccc
- - - - - - - - - - - - - - -tacctgg
- - - - - - - - - - - - - - - - - - - tgctatg
- - - - - - - - - - - - - - - - - - - - - - - ttggttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gattctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttcatat