Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttacttgctgttacattttttgtaataggtttgtaagctttatatagcatgatcttatggcaaggaaatacatctgtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGA

Basic information

species Zea mays
transcript GRMZM2G074898_T01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G074898_T01 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os05g40820.3 (Oryza sativa), 3'ss of exon 3
gttac-ttgctgttacattttttgtaataggtttgtaagctttatatagc-atgatcttatggcaaggaaatacatctgtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGA
|| |   || |  |  | |  |||   ||   |    |  ||| | |    |  |  || | | ||    ||   | | || |   |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
gtcaggctgttcatcgaatgattgctttaatgtcaggatatttctctgcttagaaggttgttgtaaacgtattggtatattgt-acagGTCTTCCTTTTTGCAAACTCAAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCCATGTACAGGAAGCAGCACAAGA

upper sequence: GRMZM2G074898_T01 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA03G34700.1 (Glycine max), 3'ss of exon 2
-------------------------------------------------------------gtt--acttgctgtta------cattttttgtaataggtttgtaagctttata-tagc-atgatcttatggcaaggaaatacatctgtt---tttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGA
                                                             |||  | ||||| | |      |||||||  | || || || |    ||  || |||  |||||  |      |||   |   | ||||   | | ||||||||||| ||||||||||| ||||| ||||| || ||||||||||||||||||||  ||||||| |||||||| || |||||||| ||||| ||||| |
gtgacataaaatatgtctcattgaattttgggtggatgtatctcatcatttcagtctggatgttcaatttgctatgatttgatcatttttaattatggggttttttctttgttactagttatgatactgatatgagggtttttgtttgttgaatctatagGTTTTCCTGTTTGCCAACTCAAAATGTAAGCGGTATTTCCACAACCGCCTGAAGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAA

upper sequence: GRMZM2G074898_T01 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA19G37370.2 (Glycine max), 3'ss of exon 2
---------------------------------------------------------gttact-tgctgtta-catttttt-gtaatagg-----tttgtaagct-tta--tatagcat-gatcttatggcaaggaaatacatctgtt---tttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGA
                                                          || |  || ||| | |||||||| || ||  |     |||||  | |  ||  |||   || |||  |      ||||  |   | ||||   | |  |||||||||| ||||| ||||| ||||| ||| | || |||||||| |||||||||||| ||||||| |||||||| ||||||||||| ||||| ||||| |
gtaacataaaatatgttttgggttgatgtgtcgcattatttcagtctggttgttctgtttgcaatgatgtgatcattttttagttatgagggttttttgtttgttgctagttatgatattgatactgatatgaggatttttgtttgttgaatctacagGTTTTCCTGTTTGCAAACTCAAAATGTAAGAGGTATTTCCACAATCGCCTGAAGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAA

upper sequence: GRMZM2G074898_T01 (Zea mays), 3'ss of exon 3
lower sequence: GLYMA10G07680.1 (Glycine max), 3'ss of exon 2
---------------------------------------------------------------gttacttgctgttacattttttgtaataggtttgtaagctttatatagcatgatcttatggca-aggaaatacatctgtt---tttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGA
                                                                 |   | || | |||   |    |  |  ||||   | ||| ||     |  | |  ||  | |||  ||   | ||||   | |  |||||||||| ||||| ||||||||||| ||| | || ||||||||| |  |||||||  ||||||| |||||||| ||||||||||| ||||| |||||||
gtgacataatatgtttctcattgaattttgggttgatgtattgtgttattttgatatggatgttctgtgtactttgacaaaatcatcatcaattttgatcgttttttactagttattatactgatataggggatttgtttgttgaatatacagGTTTTCCTGTTTGCTAACTCGAAATGTAAGAGGTATTTCCACAACAGGTTGAAGCCATCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAGA

upper sequence: GRMZM2G074898_T01 (Zea mays), 3'ss of exon 3
lower sequence: Vv13s0074g00140.t01 (Vitis vinifera), 3'ss of exon 2
--------------------------------------------------------------------------------------------------gttacttgctgttacattttttgtaataggtttgtaagctttatatagc-----atgatcttatggcaaggaaatacatctgtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGA
                                                                                                           ||||    || || |  | | ||| ||   | |  ||  |     ||  |  |||      | |||  |||  || ||  |||| || || |||||||| || ||||||||| | ||||| |||||||| || |||||| |||||||||||||||| || ||||| || ||||| || ||||
gtaaaaatgtggatttaattacatattttcaagtctcatatgaatatttaatttgcttgattgcctatcaaaaaatatttaatttccttgatttatttagagagcagtgttggggttgttattgt-gctttttatattctgaatgtccattaatatttatataatctcgtaattgatcaattgtt--agGTATTTCTATTTGCCAATTCAAAATGCAAGAGATACTTTCACAACCGACTTAAGCCTTCAAAGCTTACCTGGACGGCTATGTATAGAAAGCAACATAAGA

upper sequence: GRMZM2G074898_T01 (Zea mays), 3'ss of exon 3
lower sequence: Vv16s0100g00650.t01 (Vitis vinifera), 3'ss of exon 1
---------------------------------------------gttacttgctgt-tacattttttgtaataggtt-----tgtaagctttatatagcatgatcttatggcaaggaaatacatctgttt---ttgta---gGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGA
                                              | | |    |  ||   |   |  ||  | ||     | |  |||| || |  | | |  |  ||  |  |||   |||||||||   || ||   |||||| || |||||||| || ||||||||| | |||||||||||||| || |||||  | |||||||| |||||||| |||||||| |||||||||||||
gtaaaatgtgatgatattttcaatttggttctgtcaggggcatgtatcattcagagcatatcctacattcaaacgcttccctgtattggcttaattttacttcaattactgtaactgaatagcatctgtttcatttatatcagGTTTTTCTCTTTGCCAATTCTAAATGCAAGAGGTACTTCCACAACCGGCTTAAGCCATCGAAGCTTACATGGACAGCCATGTACAGAAAGCAGCACAAGA

upper sequence: GRMZM2G074898_T01 (Zea mays), 3'ss of exon 3
lower sequence: Vv08s0007g04210.t01 (Vitis vinifera), 3'ss of exon 2
--------------------------------------------------------------------gtta--cttgctgttacattttttgtaataggttt----gtaagctttatatagcatgatcttatggcaaggaaataca-tctgtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGA
                                                                    ||||  |||  |  | |||| | |    | || |     ||   | |  | || | || |    || ||   || |||  ||  | | | ||||| || || |||||||| || ||||||||| | |||||||||||||| ||||||||  ||||||||||||||||||| |||||||||||||| || || |
gtaattttatagctcattaaaatttatgttctgtatcagattattagccaactaaatttctactgaatgttaatcttctttcttcattgtcttggttgggctcaggggttgacctcttgta-cttgtttaattgacattaaattactctcaatatatttagGTGTTTCTATTTGCCAATTCAAAATGCAAGAGGTACTTCCACAACCGGCTGAAGCCATCAAAGCTTACCTGGACAGCCATGTACAGGAAGCAACATAAAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211481788|gb|FL382325.1|FL382325
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211346388|gb|FL410657.1|FL410657
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60340680|gb|DN207653.1|DN207653
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|17970253|gb|BM277016.1|BM277016
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211343699|gb|FL394269.1|FL394269
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|40334938|gb|CK369008.1|CK369008
EST:     ACAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211455841|gb|FL371243.1|FL371243
EST:     AGAAAATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60357584|gb|DN224557.1|DN224557
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32912748|gb|CF017560.1|CF017560
EST:     AGAAGATC-ATCTTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32912550|gb|CF017362.1|CF017362
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211518470|gb|FL391754.1|FL391754
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211081823|gb|FL380750.1|FL380750
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211275568|gb|FL307670.1|FL307670
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|5439460|gb|AI820381.1|AI820381
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60338364|gb|DN205337.1|DN205337
EST:     CCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: CCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211151698|gb|FL395044.1|FL395044
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211057427|gb|FL405183.1|FL405183
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|8665647|gb|BE186463.1|BE186463
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|33466891|gb|CF243940.1|CF243940
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32916299|gb|CF021111.1|CF021111
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGTAAGTGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|14701394|gb|BI233812.1|BI233812
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211423511|gb|FL387507.1|FL387507
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32857944|gb|CD997625.1|CD997625
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60400075|gb|DN232882.1|DN232882
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|5455916|gb|AI833606.1|AI833606
EST:     GGAAAGGCATCCGGTTTATTCGTGCTGATTTTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCCCAACCGCCTG
genomic: GGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|61117725|gb|DN558686.1|DN558686
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60338406|gb|DN205379.1|DN205379
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32916287|gb|CF021099.1|CF021099
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGTAAGTGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211205227|gb|FL427932.1|FL427932
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211397511|gb|FL028518.1|FL028518
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|14529476|gb|BI096609.1|BI096609
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60346777|gb|DN213750.1|DN213750
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211349078|gb|FL422792.1|FL422792
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|30032022|gb|CB833873.1|CB833873
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTG-TTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|27575952|gb|CA998646.1|CA998646
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60340046|gb|DN207019.1|DN207019
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211533526|gb|FL409955.1|FL409955
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60358293|gb|DN225266.1|DN225266
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60339236|gb|DN206209.1|DN206209
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211539244|gb|FL396305.1|FL396305
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211501617|gb|FL378298.1|FL378298
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|61117724|gb|DN558685.1|DN558685
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32907841|gb|CF012654.1|CF012654
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32858207|gb|CD997888.1|CD997888
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|26557169|gb|CA829404.1|CA829404
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211449456|gb|FL371664.1|FL371664
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|9730954|gb|BE509706.1|BE509706
EST:     GGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: GGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32907015|gb|CF011828.1|CF011828
EST:     AGAATATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|31612266|gb|CD568888.1|CD568888
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|37379065|gb|CF626260.1|CF626260
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211202123|gb|FL177996.1|FL177996
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGC
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGC
EST: gi|4624408|gb|AI615241.1|AI615241
EST:     CGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: CGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|30306809|gb|CD001482.1|CD001482
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|86856126|gb|DY307137.1|DY307137
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60395494|gb|DN228364.1|DN228364
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32912214|gb|CF017026.1|CF017026
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60344841|gb|DN211814.1|DN211814
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|22546116|gb|BU098437.1|BU098437
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|30306768|gb|CD001441.1|CD001441
EST:     GGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACANCCGCCTG
genomic: GGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211156590|gb|FL395424.1|FL395424
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32916277|gb|CF021089.1|CF021089
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGTAAGTGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|30306808|gb|CD001481.1|CD001481
EST:     ATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: ATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|19351218|gb|BM895750.1|BM895750
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|22489414|gb|BU049337.1|BU049337
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|5928778|gb|AW056070.1|AW056070
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60401467|gb|DN234274.1|DN234274
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211157838|gb|FL370476.1|FL370476
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211202120|gb|FL177993.1|FL177993
EST:     AGAAGATCTATCCTGGGAAAGGCNTCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTG
EST: gi|19350583|gb|BM895115.1|BM895115
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211520879|gb|FL379231.1|FL379231
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|30088004|gb|CB886209.1|CB886209
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|8930530|gb|BE225294.1|BE225294
EST:     GAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: GAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|15632310|gb|BI679403.1|BI679403
EST:     CATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: CATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|9255420|gb|BE345888.1|BE345888
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|37377343|gb|CF625268.1|CF625268
EST:     GGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: GGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211415704|gb|FL382754.1|FL382754
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|113702770|gb|EE680274.1|EE680274
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|37382041|gb|CF627940.1|CF627940
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211429599|gb|FL427249.1|FL427249
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|61117723|gb|DN558684.1|DN558684
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32863688|gb|CF003370.1|CF003370
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60344429|gb|DN211402.1|DN211402
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60346696|gb|DN213669.1|DN213669
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCATG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|28931314|gb|CB334675.1|CB334675
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|88758546|gb|DY542915.1|DY542915
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|29946890|gb|CB816375.1|CB816375
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|161591814|gb|EY960879.1|EY960879
EST:     CGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: CGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|40334799|gb|CK368869.1|CK368869
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|29947403|gb|CB816639.1|CB816639
EST:     AAGGCATCCGGTTTATTCGTGCTG-TTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|30088005|gb|CB886210.1|CB886210
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60349790|gb|DN216763.1|DN216763
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32909393|gb|CF014205.1|CF014205
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32807599|gb|CD959833.1|CD959833
EST:     GATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: GATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|33091237|gb|CF051231.1|CF051231
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|37381964|gb|CF627891.1|CF627891
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|5018398|gb|AI714591.1|AI714591
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32912830|gb|CF017642.1|CF017642
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60394206|gb|DN227076.1|DN227076
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|32908151|gb|CF012964.1|CF012964
EST:     AGAAGATCTATCCTGAGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|86470312|gb|DY236682.1|DY236682
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|120480973|gb|EH211102.1|EH211102
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTCGCCAACTCGAAATGCAAGCGCTACTTCCACWACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211103186|gb|FL427059.1|FL427059
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211085458|gb|FL413527.1|FL413527
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|67033616|gb|CO462365.1|CO462365
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|20300626|gb|BQ163569.1|BQ163569
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|29945835|gb|CB815844.1|CB815844
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211379540|gb|FL395178.1|FL395178
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCTAAATGCAAGCKCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|211408570|gb|FL414978.1|FL414978
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|9028630|gb|BE238670.1|BE238670
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCTCACAACCGCCT
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTC-CACAACCGCCT
EST: gi|78026193|gb|DV494580.1|DV494580
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|113703310|gb|EE680814.1|EE680814
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
EST: gi|60350773|gb|DN217746.1|DN217746
EST:     AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAG                         GTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG
genomic: AGAAGATCTATCCTGGGAAAGGCATCCGGTTTATTCGTGCTGATTCTCAGgttacttgct ... gtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgtaagctttatatagcatgatcttatggcaaggaaatacatctgtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGA
                                          tctgttttt  CT-rich tract
        tttatata  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttacttgctgttacattttttgtaataggtttgtaagctttatatagcatgatcttatggcaaggaaatacatctgtttttgtagGTTTTCCTTTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCAAAGCTTACCTGGACAGCAATGTACAGGAAGCAGCACAAGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAAAG