Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ccatatcatatgtactgtatcatcagatcacgatgtagctagtttatgtcttggaaccatgtgttttgaggtattctaatttctgtgtttggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGCGCTGCAGCTGCTCCCAAGGAAGAAGAGAAGGCTGCGGAGCCTGAAGAGG

Basic information

species Zea mays
transcript GRMZM2G066460_T01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G066460_T01 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os12g03880.1 (Oryza sativa), 3'ss of exon 4
ccatatcatatgtactgtatcatcagatcacgatg----tagctagtttatg--tcttggaaccatgtgttttgaggtattctaatttctgtgtttggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGCGCTGC------AGCTGCTCCCAAGGAAGAAGAGAAGGCTGCGGAGCCTGAAGAGG
  || | ||   ||||| |   | || | | | ||    | |  |  ||  |  | |    ||||    || | |  |||| |   ||   | ||    ||  |||||||| ||||||||||||||||| ||||| ||||||||||  |||  |||||||||      |||| || ||||||| |||||||||   |  ||||| |      
-tat-tgattactactggaagctaagttaatgctgatttttgagaacttgggcatttcaccaccacagtttcttacatatt-tgtcttgcctattc---ttctcagGACCCCAGCAAGTTTGCTGTTGCTGCCCCTGTTGCTGCTGCTGACAGTGGCGCTGCTGCTGTAGCTTCTTCCAAGGAGGAAGAGAAGAAGGAAGAGCCCG------

upper sequence: GRMZM2G066460_T01 (Zea mays), 3'ss of exon 3
lower sequence: LOC_Os11g04070.1 (Oryza sativa), 3'ss of exon 4
ccatatcatatgtactgtatcatcagatcacgatg----tagctagttta--tgtcttggaaccatgtgttttgaggtattctaatttctgtgtttggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGCGCTGC------AGCTGCTCCCAAGGAAGAAGAGAAGGCTGCGGAGCCTGAAGAGG
  | || ||   ||||| |   | || | | | ||    |    |  ||   | | |    ||||    || | |  |||| |   ||   | ||    ||  |||||||| ||||||||||||||||| ||| | ||||||||||  |||  |||||||||      ||||||| ||||||| |||||||||   |  ||||| |      
-taaat-attgatactggaagctaagttaatgctgatttttaagaacttgggtatttcaccaccacagtttcttacatatt-tgtcttgcctattc---ttctcagGACCCCAGCAAGTTTGCTGTTGCTGCCGCTGTTGCTGCTGCTGACAGTGGCGCTGCTGCTCCAGCTGCTTCCAAGGAGGAAGAGAAGAAGGAAGAGCCCG------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33104246|gb|CF064206.1|CF064206
EST:     AGACAGACTACTCCTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|28910201|gb|CB331316.1|CB331316
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|5499249|gb|AI855116.1|AI855116
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|71441487|gb|DR822537.1|DR822537
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|20507812|gb|BQ279779.1|BQ279779
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|21331569|gb|BQ486950.1|BQ486950
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|12045842|gb|BF727981.1|BF727981
EST:     AGACAGACTACTCATACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|4966683|gb|AI691539.1|AI691539
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|61118075|gb|DN559036.1|DN559036
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|166601770|gb|EG318713.1|EG318713
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGACTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGG
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTG-CTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGG
EST: gi|60341253|gb|DN208226.1|DN208226
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|166465956|gb|EG265156.1|EG265156
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGC
EST: gi|60351401|gb|DN218374.1|DN218374
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|5124052|gb|AI745893.1|AI745893
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|76011158|gb|DT938328.1|DT938328
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|166472715|gb|EG298855.1|EG298855
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GAACCCAAGCAAGTTTGCTGTTGCCGCCC-GGTTG
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGA-CCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTG
EST: gi|76010713|gb|DT937883.1|DT937883
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|60350682|gb|DN217655.1|DN217655
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|32940055|gb|CF044874.1|CF044874
EST:     AGACAGACTACTCCTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|78122848|gb|DV541232.1|DV541232
EST:     AGACAGACTACTCGTACCCCCATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|60399759|gb|DN232569.1|DN232569
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|60347295|gb|DN214268.1|DN214268
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|4885821|gb|AI676941.1|AI676941
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|60401392|gb|DN234199.1|DN234199
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|40336101|gb|CK370171.1|CK370171
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|166564608|gb|EG175715.1|EG175715
EST:     GGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGC
EST: gi|21331568|gb|BQ486949.1|BQ486949
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|109637414|gb|EC590959.1|EC590959
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|211341871|gb|FL078991.1|FL078991
EST:     AGACAGACTACTCATACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|21828676|gb|BQ703360.1|BQ703360
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|29543525|gb|CB603907.1|CB603907
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|37390251|gb|CF632354.1|CF632354
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|31356926|gb|CD441283.1|CD441283
EST:     AGACAGACTACTCATACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|67042342|gb|CO468597.1|CO468597
EST:     AGACAGACTACTCCTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|76920109|gb|DV168013.1|DV168013
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|76919291|gb|DV167648.1|DV167648
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|166585758|gb|EG314786.1|EG314786
EST:     CAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: CAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|33094961|gb|CF054955.1|CF054955
EST:     AGACAGACTACTCCTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|71431692|gb|DR812742.1|DR812742
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|5030503|gb|AI714697.1|AI714697
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|60338735|gb|DN205708.1|DN205708
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|22819223|gb|BU499313.1|BU499313
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|31362470|gb|CD446827.1|CD446827
EST:     AGACAGACTACTCATACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|14701155|gb|BI233573.1|BI233573
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|16927223|gb|BM080292.1|BM080292
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|78179605|gb|DV549978.1|DV549978
EST:     AGACAGACTACTCATACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|32907880|gb|CF012693.1|CF012693
EST:     AGACAGACTACTCCTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|166505132|gb|EG254394.1|EG254394
EST:     GACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: GACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|5468963|gb|AI834754.1|AI834754
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|14646155|gb|BI180344.1|BI180344
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|5005828|gb|AI711890.1|AI711890
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|5608149|gb|AI901816.1|AI901816
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|166608882|gb|EG149572.1|EG149572
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGC
EST: gi|21331311|gb|BQ486692.1|BQ486692
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|166580511|gb|EG287620.1|EG287620
EST:     ACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: ACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|166556352|gb|EG104985.1|EG104985
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGG
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGG
EST: gi|211341872|gb|FL078992.1|FL078992
EST:     AGACAGACTACTCATACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|4804273|gb|AI666139.1|AI666139
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|5468695|gb|AI834486.1|AI834486
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|30087512|gb|CB885718.1|CB885718
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGCTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|9794369|gb|BE552677.1|BE552677
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|33102223|gb|CF062183.1|CF062183
EST:     AGACAGACTACTCCTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|13126163|gb|BG316733.1|BG316733
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|32857904|gb|CD997585.1|CD997585
EST:     AGACAGACTACTCCTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCT
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCT
EST: gi|6563982|gb|AW231604.1|AW231604
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|61118074|gb|DN559035.1|DN559035
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|60356027|gb|DN223000.1|DN223000
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|37390756|gb|CF632612.1|CF632612
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|60339385|gb|DN206358.1|DN206358
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|32944223|gb|CF049042.1|CF049042
EST:     AGACAGACTACTCCTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|4966486|gb|AI691342.1|AI691342
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|166675194|gb|EG146618.1|EG146618
EST:     TGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: TGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|7216787|gb|AW562909.1|AW562909
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|4887261|gb|AI677360.1|AI677360
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|29544639|gb|CB605019.1|CB605019
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|5108371|gb|AI740084.1|AI740084
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|21389894|gb|BQ527943.1|BQ527943
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCTCCTGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|71313031|gb|DR793041.1|DR793041
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|71313033|gb|DR793042.1|DR793042
EST:     AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|32909016|gb|CF013828.1|CF013828
EST:     AGACAGACTACTCCTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
EST: gi|213172240|gb|FM186245.1|FM186245
EST:     AGACAGACTACTCCTACCCACATGCTGACAAGATCAAGGAGTACCTCAAG                         GACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC
genomic: AGACAGACTACTCGTACCCACATGCTGACAAGATCAAGGAGTACCTCAAGgtaaaacttg ... ggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atgtcttggaaccatgtgttttgaggtattctaatttctgtgtttggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGCGCTGCAGCTGCTCCCAAGGAAGAAGAGAAGGCTGCGGAGCCTGAAGAGG
                            ttctaat  putative branch site (score: 2)
                          tattctaattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ccatatcatatgtactgtatcatcagatcacgatgtagctagtttatgtcttggaaccatgtgttttgaggtattctaatttctgtgtttggttttgcagGACCCAAGCAAGTTTGCTGTTGCCGCCCCGGTTGCTGCTGGGGACTCTGGCGCTGCAGCTGCTCCCAAGGAAGAAGAGAAGGCTGCGGAGCCTGAAGAGG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - -atatgta
- - - - - - - ctgtatc
- - - - - - - - - - - - - - - - -tgtagct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgtgttt