1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gttgctgctgcttgccctttctgtttcttttatggatatcttcctttgtcactcaaactccgattcttttctttcagGCTTATTTCCAAGCTGAACCCCTTTTCGGGGATGAAGCATCTCGATGTGGCTGGTGGAACAG
species | Zea mays |
transcript | GRMZM2G065210_T03 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CTCATGAACGATCTCATGAGTGTCGGCCTGCATAGGCTGTGGAAGGACAG GCTTATTTCCAAGCTGAACCCCTTTCCGGCAATGAAGCATCTCGATGTGGCEST: gi|32843983|gb|CD983664.1|CD983664
genomic: CTCATGAACGATCTCATGAGTGTCGGCCTGCATAGGCTGTGGAAGGACAGgttgctgctg ... tttctttcagGCTTATTTCCAAGCTGAACCCCTTTTCGGGGATGAAGCATCTCGATGTGGC
EST: CTCATGAACGATCTCATGAGTGTCGGCCTGCATAGGCTGTGGAAGGACAG GCTTATTTCCAAGCTGAACCCCTTTCCGGGGATGAAGCATCTCGATGTGGC
genomic: CTCATGAACGATCTCATGAGTGTCGGCCTGCATAGGCTGTGGAAGGACAGgttgctgctg ... tttctttcagGCTTATTTCCAAGCTGAACCCCTTTTCGGGGATGAAGCATCTCGATGTGGC
gtttcttttatggatatcttcctttgtcactcaaactccgattcttttctttcagGCTTATTTCCAAGCTGAACCCCTTTTCGGGGATGAAGCATCTCGATGTGGCTGGTGGAACAG
ctccgattcttttctt CT-rich tract
attctttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttgctgctgcttgccctttctgtttcttttatggatatcttcctttgtcactcaaactccgattcttttctttcagGCTTATTTCCAAGCTGAACCCCTTTTCGGGGATGAAGCATCTCGATGTGGCTGGTGGAACAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA