1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtttgcctcttactctttttgtaagttaagctttgtaaattttctatccacatgttgttgacaattgtcttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATACTCGATCGATTAAGTCAACTATTCTACATTTTCAG
species | Zea mays |
transcript | GRMZM2G048045_T01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|211511963|gb|FL422086.1|FL422086
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACMAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAEST: gi|88756008|gb|DY540149.1|DY540149
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAA
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGA-AAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|211068069|gb|FL377958.1|FL377958
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGT-CAGACGEST: gi|211451825|gb|FL381435.1|FL381435
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACG
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|78103766|gb|DV522194.1|DV522194
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|211456722|gb|FL410364.1|FL410364
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|211214580|gb|FL385221.1|FL385221
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|211509379|gb|FL412049.1|FL412049
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|33101585|gb|CF061545.1|CF061545
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: GTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|148942098|gb|EC887100.2|EC887100
genomic: GTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|211109347|gb|FL402577.1|FL402577
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: GAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|211447310|gb|FL370711.1|FL370711
genomic: GAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|71332422|gb|DR803167.1|DR803167
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|211493638|gb|FL397225.1|FL397225
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAEST: gi|211169918|gb|FL423118.1|FL423118
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCA
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|13126325|gb|BG316895.1|BG316895
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|32802872|gb|CD955108.1|CD955108
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|211536231|gb|FL396284.1|FL396284
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAA-CCAACAGAGAAAAGTGGA-TGGGTACTATGAGTTCAGACGAAEST: gi|211538762|gb|FL372743.1|FL372743
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATG--TACTATGAGTTCAGACGAA
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|9952999|gb|BE639582.1|BE639582
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATEST: gi|71320210|gb|DR796860.1|DR796860
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
EST: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAG GATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
genomic: AGTACAAAAATTATGAGAATGTACCTAACTCTGGAGAAGAAGCTATGAAGgtttgcctct ... cttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAAT
agttaagctttgtaaattttctatccacatgttgttgacaattgtcttggaatagGATTGCAAGCCAACAGAGAAAGGTGGAATGTACTATGAGTTCAGACGAAATACTCGATCGATTAAGTCAACTATTCTACATTTTCAG
tgttgac putative branch site (score: 378)
ttgtctt putative PPT
tttgtaaattttctat TA-rich tract